RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 EREGO14944 169 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 IGHG3P01860 377 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 GNB1LQ9BYB4 327 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 CACNA1GO43497 2377 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 A0A087WV48 116 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 DAD1P61803 113 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 LINC01590Q5TEZ4 76 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 RUSC1-AS1Q66K80 236 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 TM2D1Q9BX74 207 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 ATP5IP56385 69 aaPredicted RBP8.68□□□□□ -1.02
FXR1-202ENST00000357559 SYNJ2BPP57105 145 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 CEACAM1P13688 526 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 MORN5Q5VZ52 161 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 RSPO3Q9BXY4 272 aaPredicted RBP8.67□□□□□ -1.02
FXR1-202ENST00000357559 YPEL1O60688 119 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 YPEL2Q96QA6 119 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 CSRP2Q16527 193 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 SPACA3Q8IXA5 215 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 EML6Q6ZMW3 1958 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 UBR3Q6ZT12 1888 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 PRCDQ00LT1 54 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 MMP23AO75900 390 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 TAL2Q16559 108 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 LYZL4Q96KX0 146 aa8.67□□□□□ -1.02
FXR1-202ENST00000357559 GAGE6Q13070 117 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 UCP1P25874 307 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 ZNF672Q499Z4 452 aaPredicted RBP8.66□□□□□ -1.02
FXR1-202ENST00000357559 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
FXR1-202ENST00000357559 NABP1Q96AH0 204 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 RFNGQ9Y644 331 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 LCTP09848 1927 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 IGHV4-28A0A0C4DH34 117 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 IGHV1-46P01743 117 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 PRSS57Q6UWY2 283 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 DSCR8Q96T75 97 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 WFDC1Q9HC57 220 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 SCRT2Q9NQ03 307 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 LOC102723996A0A087X1L8 192 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BKO60814 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BJP06899 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BOP23527 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BBP33778 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BDP58876 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BCP62807 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST2H2BEQ16778 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.66□□□□□ -1.02
FXR1-202ENST00000357559 ADAMTSL5Q6ZMM2 481 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BHQ93079 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 ATP6V0BQ99437 205 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BNQ99877 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 HIST1H2BMQ99879 126 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 A0A087WWC5 75 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 TRAV3A0A0B4J244 114 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 FOXG1P55316 489 aaPredicted RBP8.66□□□□□ -1.02
FXR1-202ENST00000357559 LINC00205P59089 165 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
FXR1-202ENST00000357559 PPBPP02775 128 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 SPINK13Q1W4C9 94 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 DKK4Q9UBT3 224 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 VCYO14598 125 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 NUP35Q8NFH5 326 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 TRIOBPQ9H2D6 2365 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 IGHV1-3A0A0C4DH29 117 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 PINLYPA6NC86 204 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 IL17RELQ6ZVW7 336 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 RNF223E7ERA6 249 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 C5orf24Q7Z6I8 188 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 ADAMTSL3P82987 1691 aa8.65□□□□□ -1.02
FXR1-202ENST00000357559 TRAV12-2A0A075B6T6 113 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 C8orf49Q96NF6 230 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 PAX9P55771 341 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 DEFB131AP59861 70 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 UBE2BP63146 152 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 TEX38Q6PEX7 206 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 AMN1Q8IY45 258 aa8.65□□□□□ -1.03
FXR1-202ENST00000357559 CXCL1P09341 107 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 TRAV9-1A0A075B6T8 112 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 CHKB-CPT1BH3BT56 60 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 IGLV2-23P01705 113 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 FGFBP3Q8TAT2 258 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 Q9HAA7 133 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 GLI3P10071 1580 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 SOCS3O14543 225 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 GAGE7O76087 117 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 GAGE12FP0CL80 117 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 GAGE12GP0CL81 117 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 GAGE12IP0CL82 117 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 DUTP33316 252 aaKnown RBP8.64□□□□□ -1.03
FXR1-202ENST00000357559 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
FXR1-202ENST00000357559 BAALCQ8WXS3 180 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 COL11A2P13942 1736 aaPredicted RBP8.64□□□□□ -1.03
FXR1-202ENST00000357559 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
FXR1-202ENST00000357559 STPG4Q8N801 248 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms