RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 HIGD1BQ9P298 99 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 PRSS47A8MTI9 375 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 SELLP14151 372 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 TRIP6Q15654 476 aaKnown RBP5.44□□□□□ -1.54
VPS13B-202ENST00000357162 C8orf31Q8N9H6 132 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 VGLL1Q99990 258 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 RPUSD1Q9UJJ7 312 aaKnown RBP5.44□□□□□ -1.54
VPS13B-202ENST00000357162 WDR90Q96KV7 1748 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 WBP1Q96G27 269 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 PPIAL4CA0A0B4J2A2 164 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 PPIAL4GP0DN37 164 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 TRBV7-1A0A0A6YYK4 115 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 GFI1BQ5VTD9 330 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 LINC00477Q96M19 166 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 FOXI3A8MTJ6 420 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-202ENST00000357162 NRTNQ99748 197 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 RSPO3Q9BXY4 272 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-202ENST00000357162 SIGLEC8Q9NYZ4 499 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 C2CD4DB7Z1M9 353 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 FOXL2NBQ6ZUU3 175 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 LOC105371242A0A075B767 164 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 CFHR2P36980 270 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 CITED2Q99967 270 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-202ENST00000357162 PRSS46E5RG02 174 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 KLRD1Q13241 179 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 TCTEX1D4Q5JR98 221 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 CFAP161Q6P656 301 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 SPSB2Q99619 263 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 AMN1Q8IY45 258 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 ITLN1Q8WWA0 313 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 CCL13Q99616 98 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 SHISA8B8ZZ34 492 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 TBX6O95947 436 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-202ENST00000357162 PATE4P0C8F1 98 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 SAA2P0DJI9 122 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-202ENST00000357162 PKIGQ9Y2B9 76 aa5.44□□□□□ -1.54
VPS13B-202ENST00000357162 C17orf98A8MV24 154 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 SAA1P0DJI8 122 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-202ENST00000357162 TRAV13-2A0A0B4J235 113 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 MPV17L2Q567V2 206 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 DEFB125Q8N687 156 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 GTSF1LQ9H1H1 148 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 PCOLCEQ15113 449 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 PDCD1Q15116 288 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 TGIF1Q15583 401 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 PMS2CLQ68D20 193 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 ADAMTSL5Q6ZMM2 481 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 TMEM52Q8NDY8 209 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 GFI1Q99684 422 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 ADCYAP1P18509 176 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 GAGE5Q13069 117 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 GAGE6Q13070 117 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 POLR3KQ9Y2Y1 108 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-202ENST00000357162 J3KT08 172 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 MIR17HGQ75NE6 70 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 TMEM171Q8WVE6 324 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 SHISA7A6NL88 538 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 PDE6GP18545 87 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 TMEM92Q6UXU6 159 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 MST1P26927 711 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 DMRTC1Q5HYR2 192 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 PSG8Q9UQ74 426 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 FAM223BA6NKX1 122 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 MNX1P50219 401 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-202ENST00000357162 FAM223AQ8IWN6 122 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 Q8NFD4 153 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 CFAP46Q8IYW2 2715 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 IMMP1LQ96LU5 166 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 C1QTNF4Q9BXJ3 329 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 TMSB15BA0A087X1C1 80 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 SRSF3P84103 164 aaKnown RBP5.43□□□□□ -1.54
VPS13B-202ENST00000357162 FAM104BQ5XKR9 115 aa5.43□□□□□ -1.54
VPS13B-202ENST00000357162 A0A1W2PPM0 123 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 F8VRH5 84 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 TMEM167AQ8TBQ9 72 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 GFRA3O60609 400 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 BEX4Q9NWD9 120 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-202ENST00000357162 CRXO43186 299 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-202ENST00000357162 PRSS53Q2L4Q9 553 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 MRPL53Q96EL3 112 aaKnown RBP5.42□□□□□ -1.54
VPS13B-202ENST00000357162 RNASE7Q9H1E1 156 aaKnown RBP5.42□□□□□ -1.54
VPS13B-202ENST00000357162 TMEM133Q9H2Q1 129 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 Q86TA4 180 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 MUC21A0A0G2JKD1 596 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 MUC21A0A140T8X8 626 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 GCSAMLQ5JQS6 135 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 MUC21Q5SSG8 566 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 ZNF474Q6S9Z5 364 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-202ENST00000357162 SHANK2-AS3Q9BTD1 123 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 MBNL3Q9NUK0 354 aaKnown RBP5.42□□□□□ -1.54
VPS13B-202ENST00000357162 PGPEP1Q9NXJ5 209 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 A0A1W2PPE3 182 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 CCL2P13500 99 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 APOBEC3AP31941 199 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-202ENST00000357162 ZC2HC1BQ5TFG8 222 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 C1QL2Q7Z5L3 287 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 NUP210LQ5VU65 1888 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 HLA-DRB4P13762 266 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 IGFBPL1Q8WX77 278 aa5.42□□□□□ -1.54
VPS13B-202ENST00000357162 SRXN1Q9BYN0 137 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms