RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ZCCHC24Q8N2G6 241 aaKnown RBP9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 SCN10AQ9Y5Y9 1956 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 LINC00271P0C7V0 271 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 NCOR1P1Q9H4R4 102 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 TCTEX1D4Q5JR98 221 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 C9JQL5 133 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 AZU1P20160 251 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 FAM90A1Q86YD7 464 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 C20orf144Q9BQM9 153 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 C5orf67F2Z3F1 127 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 HAMPP81172 84 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 ZNF329Q86UD4 541 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 SDK2Q58EX2 2172 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 TRAV3A0A0B4J244 114 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 SRRM4A7MD48 611 aaKnown RBP9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 J3QW42 95 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 C10orf55Q5SWW7 151 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 C17orf100A8MU93 164 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 FCN3O75636 299 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 TMEM219Q86XT9 240 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 IGKV1-9A0A0C4DH69 117 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 PRB2P02812 416 aaPredicted RBP9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 WDR83OSQ9Y284 106 aa9.06□□□□□ -0.96
GTF3C1-201ENST00000356183 SAP25Q8TEE9 199 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 A0A1B0GWJ7 208 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 RPL36AP83881 106 aaKnown RBP9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 RPL36ALQ969Q0 106 aaKnown RBP9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 BRCA1P38398 1863 aaKnown RBP9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 KLRD1Q13241 179 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 WBP1Q96G27 269 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 LINC01549A6NIU2 74 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 SS18Q15532 418 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 C8orf49Q96NF6 230 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 PRSS22Q9GZN4 317 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 TRAV41A0A0B4J266 112 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 FAM90A9PA6NNJ1 464 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 UBE2E2Q96LR5 201 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 TRBV20-1A0A075B6N2 111 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 SAP30O75446 220 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 GAGE4Q13068 117 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 GAGE5Q13069 117 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 GAGE6Q13070 117 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 PMVKQ15126 192 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 C5orf24Q7Z6I8 188 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 FGFBP3Q8TAT2 258 aa9.05□□□□□ -0.96
GTF3C1-201ENST00000356183 K7ERJ3 54 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 RBM3P98179 157 aaKnown RBP9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 C1orf43Q9BWL3 253 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 GREB1LQ9C091 1923 aaPredicted RBP9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 C15orf32Q32M92 178 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 FAM166AQ6J272 317 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 VMO1Q7Z5L0 202 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 CLPSL1A2RUU4 121 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 DOCK6Q96HP0 2047 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 SPTA1P02549 2419 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 LCTP09848 1927 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 CACNA1DQ01668 2161 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 IGHG3P01860 377 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 PPP1R32Q7Z5V6 425 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 C9orf106Q8NAJ2 232 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 PPDPFLQ8WWR9 84 aa9.04□□□□□ -0.96
GTF3C1-201ENST00000356183 F8W1H4 67 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 WNT2P09544 360 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 BOD1L2Q8IYS8 172 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 MESP1Q9BRJ9 268 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 TINCRA0A1B0GVN0 87 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 FGF6P10767 208 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 SLC25A16P16260 332 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 KIF26BQ2KJY2 2108 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 K7EP13 123 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 K7EP34 96 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 NDUFS5O43920 106 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 PFN2P35080 140 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 CFHR2P36980 270 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 SRSF7Q16629 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 NTF4P34130 210 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 CEND1Q8N111 149 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 UBL5Q9BZL1 73 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 ZDBF2Q9HCK1 2354 aa9.03□□□□□ -0.96
GTF3C1-201ENST00000356183 SPANXA1Q9NS26 97 aa9.02□□□□□ -0.96
GTF3C1-201ENST00000356183 CFHR3Q02985 330 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 DSCR8Q96T75 97 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 RPP25LQ8N5L8 163 aaKnown RBP9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 TP53TG1Q9Y2A0 90 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 TMEM213A2RRL7 107 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 LINC00479Q96M42 142 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 LOC285556D6RIA3 1793 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 DTX1Q86Y01 620 aa9.02□□□□□ -0.97
GTF3C1-201ENST00000356183 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
GTF3C1-201ENST00000356183 IGHV2-26A0A0B4J1V2 119 aa9.01□□□□□ -0.97
GTF3C1-201ENST00000356183 IGHV1-18A0A0C4DH31 117 aa9.01□□□□□ -0.97
GTF3C1-201ENST00000356183 TMEM200BQ69YZ2 307 aa9.01□□□□□ -0.97
GTF3C1-201ENST00000356183 LY6G5BQ8NDX9 201 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms