RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 K7EM74 188 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 SLC25A48Q6ZT89 311 aaKnown RBP9.98□□□□□ -0.81
COLCA1-201ENST00000355430 RNF5Q99942 180 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 ST20Q9HBF5 79 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 MRPL27Q9P0M9 148 aaKnown RBP9.98□□□□□ -0.81
COLCA1-201ENST00000355430 PCNX2A6NKB5 2137 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 YPEL3P61236 119 aaPredicted RBP9.98□□□□□ -0.81
COLCA1-201ENST00000355430 MRPL52Q86TS9 123 aaKnown RBP9.98□□□□□ -0.81
COLCA1-201ENST00000355430 OR5AN1Q8NGI8 311 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 V9GYV3 84 aa9.98□□□□□ -0.81
COLCA1-201ENST00000355430 SHANK1Q9Y566 2161 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 FOXC2Q99958 501 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 DOCK7Q96N67 2140 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 TRAV8-6A0A0B4J262 113 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 C15orf65H3BRN8 121 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 TCRAP04437 139 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 ASPHD1Q5U4P2 390 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 FNDC10F2Z333 226 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 H3BUT2 72 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 DUX4L9Q6RFH8 374 aaPredicted RBP9.97□□□□□ -0.81
COLCA1-201ENST00000355430 FAM159AQ6UWV7 190 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 PCNX3Q9H6A9 2034 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 PSG1P11464 419 aa9.97□□□□□ -0.81
COLCA1-201ENST00000355430 FNDC4Q9H6D8 234 aaPredicted RBP9.97□□□□□ -0.81
COLCA1-201ENST00000355430 PRTN3P24158 256 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 PRSS8Q16651 343 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 ZNF138P52744 262 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 HEATR1Q9H583 2144 aaKnown RBP9.96□□□□□ -0.81
COLCA1-201ENST00000355430 LOC107984156A0A0G2JMH3 177 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 ZNF134P52741 427 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 PVRIGQ6DKI7 326 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 CRIP3Q6Q6R5 217 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 ARL17AQ8IVW1 177 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 MCRIP2Q9BUT9 160 aaKnown RBP9.96□□□□□ -0.81
COLCA1-201ENST00000355430 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.81
COLCA1-201ENST00000355430 LEPP41159 167 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 RPL15P61313 204 aaKnown RBP9.96□□□□□ -0.82
COLCA1-201ENST00000355430 CACNG7P62955 275 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 SLC25A39Q9BZJ4 359 aaPredicted RBP9.96□□□□□ -0.82
COLCA1-201ENST00000355430 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 GGTLC3B5MD39 225 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 F2Z2F3 143 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 TRGV9Q99603 122 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 ASCL2Q99929 193 aa9.96□□□□□ -0.82
COLCA1-201ENST00000355430 PMS2P5A8MQ11 134 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 K7EN84 100 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 SLC25A2Q9BXI2 301 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 C17orf58Q2M2W7 97 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 KLHL30-AS1Q8NEE0 82 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 IGHV1-3A0A0C4DH29 117 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 SAA4P35542 130 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 UBE2E1P51965 193 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 OR1N2Q8NGR9 330 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 DUX3Q96PT4 197 aa9.95□□□□□ -0.82
COLCA1-201ENST00000355430 HBDP02042 147 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 HTN3P15516 51 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 DLX1P56177 255 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 MPV17L2Q567V2 206 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 NUP210LQ5VU65 1888 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 IGHV1-69DA0A0B4J2H0 117 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 DUSP14O95147 198 aaKnown RBP9.94□□□□□ -0.82
COLCA1-201ENST00000355430 IGHV1-69P01742 117 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 SYS1-DBNDD2H3BUS1 97 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 LINC01587Q99440 93 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 IGHV2-70DA0A0C4DH43 119 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 TMEM238LA0A1B0GVL6 79 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 A6NJY4 79 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 M0R3E3 92 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 NPSP0C0P6 89 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 FXYD7P58549 80 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 VWC2Q2TAL6 325 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 LYPD2Q6UXB3 125 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 PYGO2Q9BRQ0 406 aa9.94□□□□□ -0.82
COLCA1-201ENST00000355430 ITGB1BP1O14713 200 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
COLCA1-201ENST00000355430 LINC00527Q9UJ94 153 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 NBASA2RRP1 2371 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 SLAQ13239 276 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 Q6ZPA2 131 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 A0A087X0K7 114 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 PAX8Q06710 450 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 SMIM12Q96EX1 92 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 IGKV2-40A0A087WW87 121 aaPredicted RBP9.93□□□□□ -0.82
COLCA1-201ENST00000355430 D6R8Y8 96 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 BUB1B-PAK6H3BSN5 160 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 IGKV2D-40P01614 121 aaPredicted RBP9.93□□□□□ -0.82
COLCA1-201ENST00000355430 EVI2AP22794 236 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
COLCA1-201ENST00000355430 PCDH15Q96QU1 1955 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 M0R381 172 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 TOMM40O96008 361 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 Q8TCH9 128 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 MS4A6AQ9H2W1 248 aa9.93□□□□□ -0.82
COLCA1-201ENST00000355430 YLPM1P49750 1951 aaKnown RBP9.92□□□□□ -0.82
COLCA1-201ENST00000355430 H7C2G1 150 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms