RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OR7C1O76099 320 aaPredicted RBP8.5□□□□□ -1.05
RTN3-204ENST00000354497 PRH1P02810 166 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 TRGV3P03979 118 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 IGLC1P0CG04 106 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 Q0VG73 95 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 ZNF266Q14584 549 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 CT45A1Q5HYN5 189 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 UNQ5815/PRO19632Q6UWF5 114 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 PPP1R27Q86WC6 154 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 FAM219AQ8IW50 185 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 CYB561D1Q8N8Q1 229 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 CT45A3Q8NHU0 189 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 NABP2Q9BQ15 211 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 FAM103A1Q9BTL3 118 aaKnown RBP8.5□□□□□ -1.05
RTN3-204ENST00000354497 MRPL20Q9BYC9 149 aaKnown RBP8.5□□□□□ -1.05
RTN3-204ENST00000354497 PLEKHJ1Q9NW61 149 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 TNFRSF18Q9Y5U5 241 aa8.5□□□□□ -1.05
RTN3-204ENST00000354497 IZUMO1RA6ND01 250 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 NUPR2A6NF83 97 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 SPINT2O43291 252 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 PSG1P11464 419 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 S100A7P31151 101 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 PPP1CCP36873 323 aaKnown RBP8.49□□□□□ -1.05
RTN3-204ENST00000354497 ZNF134P52741 427 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 TMEM267Q0VDI3 215 aaPredicted RBP8.49□□□□□ -1.05
RTN3-204ENST00000354497 RAB31Q13636 194 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 C19orf54Q5BKX5 351 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 KCNIP4Q6PIL6 250 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 Q6ZN92 141 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 Q6ZWC4 215 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 ZNF439Q8NDP4 499 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 OR9G4Q8NGQ1 327 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 CMTM2Q8TAZ6 248 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 FAM3DQ96BQ1 224 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 ABHD14BQ96IU4 210 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 PSMG3Q9BT73 122 aaPredicted RBP8.49□□□□□ -1.05
RTN3-204ENST00000354497 FBXL15Q9H469 300 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 FRRS1LQ9P0K9 344 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 PXMP4Q9Y6I8 212 aa8.49□□□□□ -1.05
RTN3-204ENST00000354497 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 MPPED1O15442 326 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 ISG15P05161 165 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 CTSDP07339 412 aaPredicted RBP8.48□□□□□ -1.05
RTN3-204ENST00000354497 ZNF137PP52743 207 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 UCP3P55916 312 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 NANOS3P60323 173 aaKnown RBP8.48□□□□□ -1.05
RTN3-204ENST00000354497 CX3CL1P78423 397 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 UFSP1Q6NVU6 142 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 GTF2H5Q6ZYL4 71 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 RARRES2Q99969 163 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 WFDC10AQ9H1F0 79 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 TRAPPC2LQ9UL33 140 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 KMT2AQ03164 3969 aa8.48□□□□□ -1.05
RTN3-204ENST00000354497 TMEM212A6NML5 194 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 M0QYG6 137 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 TAX1BP3O14907 124 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 CKS1BP61024 79 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 SPATA45Q537H7 98 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 LINC00322Q6ZN03 302 aaPredicted RBP8.47□□□□□ -1.05
RTN3-204ENST00000354497 Q8N976 141 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 OR5D14Q8NGL3 314 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 OR1L1Q8NH94 360 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 RAB9BQ9NP90 201 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 SIGLEC8Q9NYZ4 499 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 PAM16Q9Y3D7 125 aa8.47□□□□□ -1.05
RTN3-204ENST00000354497 TMEM250H0YL14 139 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 HBZP02008 142 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 UCP1P25874 307 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 GALR1P47211 349 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 CRIP2P52943 208 aaPredicted RBP8.46□□□□□ -1.05
RTN3-204ENST00000354497 S100A10P60903 97 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 KLF5Q13887 457 aaPredicted RBP8.46□□□□□ -1.05
RTN3-204ENST00000354497 C1orf100Q5SVJ3 147 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 C19orf35Q6ZS72 473 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 LHFPL1Q86WI0 220 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 NPBQ8NG41 125 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 FAM213BQ8TBF2 198 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 MBD3L1Q8WWY6 194 aa8.46□□□□□ -1.05
RTN3-204ENST00000354497 RTBDNQ9BSG5 229 aaPredicted RBP8.46□□□□□ -1.05
RTN3-204ENST00000354497 ABCA13Q86UQ4 5058 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 A0A1W2PPK0 400 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 C17orf112F2Z3M2 114 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 FAM229AH3BQW9 127 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 FCN1O00602 326 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 RRHO14718 337 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 NDUFA3O95167 84 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 CSN3P07498 182 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 CD7P09564 240 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 EGR2P11161 476 aaPredicted RBP8.46□□□□□ -1.06
RTN3-204ENST00000354497 RBM11P57052 281 aaKnown RBP8.46□□□□□ -1.06
RTN3-204ENST00000354497 GNMTQ14749 295 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 CEMP1Q6PRD7 247 aaPredicted RBP8.46□□□□□ -1.06
RTN3-204ENST00000354497 ZNF497Q6ZNH5 498 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 LRTM2Q8N967 370 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 TMEM230Q96A57 120 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 NICN1Q9BSH3 213 aa8.46□□□□□ -1.06
RTN3-204ENST00000354497 LPAR5Q9H1C0 372 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms