RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 NDUFS7O75251 213 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 KRTAP27-1Q3LI81 207 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 MORN3Q6PF18 240 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-203ENST00000349748 ZFP2Q6ZN57 461 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 C17orf82Q86X59 251 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-203ENST00000349748 OR9G1Q8NH87 305 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 HIST1H4GQ99525 98 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 SOX21Q9Y651 276 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-203ENST00000349748 SDK2Q58EX2 2172 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 WI2-2373I1.2A0A1W2PRP0 233 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 PLAUP00749 431 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 TGFAP01135 160 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 SRYQ05066 204 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 ZBTB34Q8NCN2 500 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 PRRG4Q9BZD6 226 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 FBXL15Q9H469 300 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 DMXL1Q9Y485 3027 aa8.54□□□□□ -1.04
CAPN3-203ENST00000349748 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 IGHV3-9P01782 118 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 PRB4P10163 310 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-203ENST00000349748 DUTP33316 252 aaKnown RBP8.53□□□□□ -1.04
CAPN3-203ENST00000349748 MPV17P39210 176 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 HOXA4Q00056 320 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-203ENST00000349748 TEN1Q86WV5 123 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 RFESDQ8TAC1 157 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 DLX4Q92988 240 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-203ENST00000349748 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 GVINP1Q7Z2Y8 2422 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 H3BVH4 76 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 DUX1O43812 170 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 SNCGO76070 127 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 NFAM1Q8NET5 270 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-203ENST00000349748 PRSS33Q8NF86 280 aa8.53□□□□□ -1.04
CAPN3-203ENST00000349748 DAZAP1Q96EP5 407 aaKnown RBP8.53□□□□□ -1.04
CAPN3-203ENST00000349748 TET2Q6N021 2002 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-203ENST00000349748 SRRM4A7MD48 611 aaKnown RBP8.52□□□□□ -1.04
CAPN3-203ENST00000349748 D6R8Y8 96 aa8.52□□□□□ -1.04
CAPN3-203ENST00000349748 HAX1O00165 279 aa8.52□□□□□ -1.04
CAPN3-203ENST00000349748 TCF15Q12870 199 aa8.52□□□□□ -1.04
CAPN3-203ENST00000349748 NRGNQ92686 78 aa8.52□□□□□ -1.04
CAPN3-203ENST00000349748 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.04
CAPN3-203ENST00000349748 TMEM8BA6NDV4 472 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 FCN3O75636 299 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 CEACAM4O75871 244 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 NGFP01138 241 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 IGHV3-13P01766 116 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 HBDP02042 147 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 TFF1P04155 84 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 THBDP07204 575 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 FOXF2Q12947 444 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 LINC00596Q86U02 117 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 ADAMTS20P59510 1910 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 C19orf71A6NCJ1 209 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 H3BTX0 84 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 GLRXP35754 106 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 FOXB1Q99853 325 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 PAXXQ9BUH6 204 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 MLST8Q9BVC4 326 aa8.52□□□□□ -1.05
CAPN3-203ENST00000349748 PCSK5Q92824 1860 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 MRPL23Q16540 153 aaKnown RBP8.51□□□□□ -1.05
CAPN3-203ENST00000349748 ZC2HC1BQ5TFG8 222 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 PLXDC1Q8IUK5 500 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 ASCL2Q99929 193 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 CEP250Q9BV73 2442 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 LY6G6EA0A0G2JKS1 128 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 OVOL3O00110 214 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 COL8A1P27658 744 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 ANKRD29Q8N6D5 301 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 RPEQ96AT9 228 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 U3KQA8 63 aa8.51□□□□□ -1.05
CAPN3-203ENST00000349748 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 TRAV25A0A0B4J276 109 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 A0A1B0GUT8 65 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 PROP1O75360 226 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 SP1P08047 785 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 PPP1R27Q86WC6 154 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 CIARTQ8N365 385 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-203ENST00000349748 RASL10AQ92737 203 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 SRXN1Q9BYN0 137 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 EPDR1Q9UM22 224 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 PGPA6NDG6 321 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 PSPNO60542 156 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 IL4P05112 153 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 LINC00694P0DN24 101 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 CT83Q5H943 113 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 KLF17Q5JT82 389 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-203ENST00000349748 PEAR1Q5VY43 1037 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-203ENST00000349748 WDR31Q8NA23 367 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 RNF138Q8WVD3 245 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 VCX2Q9H322 139 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 SVILO95425 2214 aa8.5□□□□□ -1.05
CAPN3-203ENST00000349748 A0A096LPE4 126 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 A0A1W2PPZ6 126 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 Q6ZS92 163 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms