RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 ATP5L2Q7Z4Y8 100 aa12.54□□□□□ -0.4
PTPRO-202ENST00000348962 E9PQ18 207 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 AMBPP02760 352 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 IGKV1-16P04430 117 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 CKS1BP61024 79 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 NCOR1P1Q9H4R4 102 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 NRN1Q9NPD7 142 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 ATP6V0E1O15342 81 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 TCF21O43680 179 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 MGST2Q99735 147 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
PTPRO-202ENST00000348962 APOMO95445 188 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 IGHV3-53P01767 116 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 LINC00614P0C842 121 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 LINC00469Q8N7U9 141 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 CACNA1AO00555 2505 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
PTPRO-202ENST00000348962 LMO1P25800 156 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 PLNP26678 52 aa12.53□□□□□ -0.4
PTPRO-202ENST00000348962 Q71RC1 249 aaPredicted RBP12.53□□□□□ -0.4
PTPRO-202ENST00000348962 DDTP30046 118 aa12.52□□□□□ -0.4
PTPRO-202ENST00000348962 FXYD7P58549 80 aa12.52□□□□□ -0.4
PTPRO-202ENST00000348962 WFDC1Q9HC57 220 aa12.52□□□□□ -0.4
PTPRO-202ENST00000348962 VWA8A3KMH1 1905 aa12.52□□□□□ -0.4
PTPRO-202ENST00000348962 DPM2O94777 84 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 DEFB130BP0DP73 79 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 DEFB130AP0DP74 79 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 SEC11AP67812 179 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 MORN3Q6PF18 240 aaPredicted RBP12.52□□□□□ -0.41
PTPRO-202ENST00000348962 OR5A1Q8NGJ0 315 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 AGMATQ9BSE5 352 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 COL4A6Q14031 1691 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.41
PTPRO-202ENST00000348962 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 EVI2AP22794 236 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 PSG3Q16557 428 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 SPATA31B1PQ5VZV4 182 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 LRRK1Q38SD2 2015 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 QRFPP83859 136 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 FNDC10F2Z333 226 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 A8MXK9 166 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 LINC00587B1AMM8 73 aa12.51□□□□□ -0.41
PTPRO-202ENST00000348962 CUL9Q8IWT3 2517 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 IGLV1-44P01699 117 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 RNF144BQ7Z419 303 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 NDUFB8O95169 186 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 LOXP28300 417 aaPredicted RBP12.5□□□□□ -0.41
PTPRO-202ENST00000348962 Q6ZR03 302 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 GNB1LQ9BYB4 327 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 A0A1W2PPI3 338 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 SNAI2O43623 268 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 NTF4P34130 210 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 C14orf144Q96I85 54 aa12.5□□□□□ -0.41
PTPRO-202ENST00000348962 IGLV3-9A0A075B6K5 115 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 ZNF815PA8K554 130 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 SERF1AO75920 110 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 C5orf24Q7Z6I8 188 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 RPP25LQ8N5L8 163 aaKnown RBP12.49□□□□□ -0.41
PTPRO-202ENST00000348962 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
PTPRO-202ENST00000348962 LINC00158P58513 81 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 LINC00205P59089 165 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 PDE6HQ13956 83 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 CHTOPQ9Y3Y2 248 aaKnown RBP12.49□□□□□ -0.41
PTPRO-202ENST00000348962 Q8TAT8 98 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 VCYO14598 125 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 CA1P00915 261 aaPredicted RBP12.49□□□□□ -0.41
PTPRO-202ENST00000348962 TMEM249Q2WGJ8 235 aa12.49□□□□□ -0.41
PTPRO-202ENST00000348962 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 C15orf62A8K5M9 175 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
PTPRO-202ENST00000348962 S100A7L2Q5SY68 101 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 TMEM170AQ8WVE7 144 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 LAGE3Q14657 143 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 SHANK2-AS3Q9BTD1 123 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 SPG11Q96JI7 2443 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 MST1LQ2TV78 715 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 TEX36Q5VZQ5 186 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 IFI27L1Q96BM0 104 aa12.48□□□□□ -0.41
PTPRO-202ENST00000348962 FGF16O43320 207 aa12.47□□□□□ -0.41
PTPRO-202ENST00000348962 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
PTPRO-202ENST00000348962 JPT2Q9H910 190 aa12.47□□□□□ -0.41
PTPRO-202ENST00000348962 YPEL3P61236 119 aaPredicted RBP12.47□□□□□ -0.41
PTPRO-202ENST00000348962 GZMBP10144 247 aa12.47□□□□□ -0.41
PTPRO-202ENST00000348962 CHCHD1Q96BP2 118 aaKnown RBP12.47□□□□□ -0.41
PTPRO-202ENST00000348962 ZNF581Q9P0T4 197 aa12.47□□□□□ -0.41
PTPRO-202ENST00000348962 G3V318 75 aa12.47□□□□□ -0.41
PTPRO-202ENST00000348962 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
PTPRO-202ENST00000348962 GTF3C1Q12789 2109 aa12.46□□□□□ -0.41
PTPRO-202ENST00000348962 TDGF1P3P51864 188 aa12.46□□□□□ -0.41
PTPRO-202ENST00000348962 MALRD1Q5VYJ5 2156 aa12.46□□□□□ -0.41
PTPRO-202ENST00000348962 SH2D1AO60880 128 aa12.46□□□□□ -0.41
PTPRO-202ENST00000348962 DAD1P61803 113 aa12.46□□□□□ -0.41
PTPRO-202ENST00000348962 XCL2Q9UBD3 114 aa12.46□□□□□ -0.41
PTPRO-202ENST00000348962 ZGRF1Q86YA3 2104 aa12.46□□□□□ -0.41
PTPRO-202ENST00000348962 ELANEP08246 267 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms