RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 FGF8P55075 233 aaPredicted RBP14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 C16orf54Q6UWD8 224 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 LCN15Q6UWW0 184 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 DPPA3Q6W0C5 159 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 RNF141Q8WVD5 230 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 TECRQ9NZ01 308 aaKnown RBP14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 PEMTQ9UBM1 199 aa14.39□□□□□ -0.11
CHMP4A-201ENST00000347519 SNRPCP09234 159 aaKnown RBP14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 STAG3L2P0CL84 134 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 STAG3L3P0CL85 134 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 PYYP10082 97 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 GLMPQ8WWB7 406 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 MBD3L1Q8WWY6 194 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 ELOVL1Q9BW60 279 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 MLXQ9UH92 298 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 SMAD5-AS1Q9Y6J3 95 aa14.38□□□□□ -0.11
CHMP4A-201ENST00000347519 A0A1B0GV50 99 aa14.37□□□□□ -0.11
CHMP4A-201ENST00000347519 C17orf77Q96MU5 243 aa14.37□□□□□ -0.11
CHMP4A-201ENST00000347519 MAP1LC3B2A6NCE7 125 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 M0QZ24 198 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 ARL14EPLP0DKL9 152 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 GP9P14770 177 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 ZNF767PQ75MW2 155 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 OR8I2Q8N0Y5 310 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 MAP1LC3BQ9GZQ8 125 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 TMPRSS5Q9H3S3 457 aa14.36□□□□□ -0.11
CHMP4A-201ENST00000347519 NMBP08949 121 aa14.35□□□□□ -0.11
CHMP4A-201ENST00000347519 H2AFB1P0C5Y9 115 aa14.35□□□□□ -0.11
CHMP4A-201ENST00000347519 CCL20P78556 96 aa14.35□□□□□ -0.11
CHMP4A-201ENST00000347519 C1orf194Q5T5A4 169 aa14.35□□□□□ -0.11
CHMP4A-201ENST00000347519 SFT2D1Q8WV19 159 aa14.35□□□□□ -0.11
CHMP4A-201ENST00000347519 MARC2Q969Z3 335 aa14.35□□□□□ -0.11
CHMP4A-201ENST00000347519 A0A1W2PS18 150 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 H3BQ15 152 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 H3BTX0 84 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 RGS13O14921 159 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 KHDC3LQ587J8 217 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 FAM90A2PQ658T7 463 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 FXYD5Q96DB9 178 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 SAT2Q96F10 170 aaPredicted RBP14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 NARS2Q96I59 477 aaKnown RBP14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 PAXXQ9BUH6 204 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 OR51M1Q9H341 326 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 OR7C2O60412 319 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 OR10J4P0C629 311 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 GCHFRP30047 84 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 TAS2R45P59539 299 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 TCF24Q7RTU0 167 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 S100A7AQ86SG5 101 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 GRAMD2BQ96HH9 432 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 TMEM14CQ9P0S9 112 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 PFDN2Q9UHV9 154 aa14.34□□□□□ -0.11
CHMP4A-201ENST00000347519 CXorf1O96002 111 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 S100A7P31151 101 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 BLOC1S1P78537 153 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 DEFB114Q30KQ6 69 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 SIGLEC15Q6ZMC9 328 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 BPIFA4PQ86YQ2 179 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 WFDC9Q8NEX5 89 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 TMEM231Q9H6L2 316 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 ZNF586Q9NXT0 402 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 SIGLEC8Q9NYZ4 499 aa14.33□□□□□ -0.12
CHMP4A-201ENST00000347519 IGKV3-7A0A075B6H7 116 aa14.32□□□□□ -0.12
CHMP4A-201ENST00000347519 SAP30O75446 220 aa14.32□□□□□ -0.12
CHMP4A-201ENST00000347519 RPL7P18124 248 aaKnown RBP14.32□□□□□ -0.12
CHMP4A-201ENST00000347519 PQLC2Q6ZP29 291 aa14.32□□□□□ -0.12
CHMP4A-201ENST00000347519 DYNLRB2Q8TF09 96 aa14.32□□□□□ -0.12
CHMP4A-201ENST00000347519 TRAV1-1A0A0B4J248 108 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 IZUMO1RA6ND01 250 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 CD33P20138 364 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 UBE2L3P68036 154 aaKnown RBP14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 IQCF2Q8IXL9 164 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 LYPD6BQ8NI32 183 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 LRRC20Q8TCA0 184 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 HRH4Q9H3N8 390 aa14.31□□□□□ -0.12
CHMP4A-201ENST00000347519 TEX46H3BTG2 121 aa14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 HIST1H1EP10412 219 aaKnown RBP14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 CD300EQ496F6 205 aaPredicted RBP14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 TMEM61Q8N0U2 210 aa14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 GBGT1Q8N5D6 347 aa14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 SUN5Q8TC36 379 aa14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 BLNKQ8WV28 456 aa14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 GPR82Q96P67 336 aa14.3□□□□□ -0.12
CHMP4A-201ENST00000347519 A0A087X0K7 114 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 ZNF785A8K8V0 405 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 SLC17A3O00476 420 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 IGLL1P15814 213 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 ATF4P18848 351 aaPredicted RBP14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 BMI1P35226 326 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 GALR1P47211 349 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 CLLU1Q5K131 121 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 STXBP6Q8NFX7 210 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 RNF24Q9Y225 148 aa14.29□□□□□ -0.12
CHMP4A-201ENST00000347519 NBEAL1Q6ZS30 2694 aa14.28□□□□□ -0.12
CHMP4A-201ENST00000347519 HELTA6NFD8 242 aa14.28□□□□□ -0.12
CHMP4A-201ENST00000347519 NDUFB4O95168 129 aa14.28□□□□□ -0.12
CHMP4A-201ENST00000347519 IGLV1-51P01701 117 aa14.28□□□□□ -0.12
CHMP4A-201ENST00000347519 HBE1P02100 147 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms