RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 A0A1B0GW64 132 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 APOMO95445 188 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 HLA-DQA1P01909 254 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 GNG5P63218 68 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 CD177Q8N6Q3 437 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 FMC1Q96HJ9 113 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 CGB7P0DN87 165 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 ERASQ7Z444 233 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 TMEM256Q8N2U0 113 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 MBNL3Q9NUK0 354 aaKnown RBP8.86□□□□□ -0.99
CLCN6-202ENST00000346436 CACNA1HO95180 2353 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 A0A1B0GW15 77 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 TMEM249Q2WGJ8 235 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 COQ2Q96H96 371 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 SSBP4Q9BWG4 385 aaPredicted RBP8.86□□□□□ -0.99
CLCN6-202ENST00000346436 MUC21A0A0G2JKD1 596 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 MUC21A0A140T8X8 626 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 PYYP10082 97 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 MUC21Q5SSG8 566 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 COL5A1-AS1Q5SY13 56 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 RUSC1-AS1Q66K80 236 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
CLCN6-202ENST00000346436 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 F5H768 121 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 IGKV1-39P01597 117 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 IGKV1D-39P04432 117 aa8.86□□□□□ -0.99
CLCN6-202ENST00000346436 LY6HO94772 140 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 SYNJ2BPP57105 145 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 ZNF726P1Q15940 193 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 TMEM14EPQ6UXP3 125 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 SLC25A48Q6ZT89 311 aaKnown RBP8.85□□□□□ -0.99
CLCN6-202ENST00000346436 CREBBPQ92793 2442 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 TRBV24-1A0A075B6N3 115 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 MLNRO43193 412 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 DAZAP2Q15038 168 aaPredicted RBP8.85□□□□□ -0.99
CLCN6-202ENST00000346436 TMEM144Q7Z5S9 345 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 WDR83OSQ9Y284 106 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 DENND4AQ7Z401 1863 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 PET117Q6UWS5 81 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 GAFA1Q96PS6 74 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 VPREB3Q9UKI3 123 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 TRAV1-1A0A0B4J248 108 aa8.85□□□□□ -0.99
CLCN6-202ENST00000346436 IGLV3-1P01715 115 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 JOSD1Q15040 202 aaPredicted RBP8.84□□□□□ -0.99
CLCN6-202ENST00000346436 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
CLCN6-202ENST00000346436 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
CLCN6-202ENST00000346436 C10orf55Q5SWW7 151 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 CDPF1Q6NVV7 123 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 IL17RELQ6ZVW7 336 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 MGST2Q99735 147 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 PRORYQ9H606 182 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 CADP27708 2225 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 C1orf122Q6ZSJ8 110 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 LINC01551Q86U37 167 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 GGTLC1Q9BX51 225 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 ZNRD1Q9P1U0 126 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 LTBP2Q14767 1821 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 NBASA2RRP1 2371 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 ATP5LO75964 103 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 WDR86Q86TI4 376 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
CLCN6-202ENST00000346436 PSG1P11464 419 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 LINC01549A6NIU2 74 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 MLANAQ16655 118 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
CLCN6-202ENST00000346436 RHPN1-AS1Q9BWJ2 59 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 LRRC75A-AS1Q8N1F1 130 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 TMEM86BQ8N661 226 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 NCOA6Q14686 2063 aaPredicted RBP8.83□□□□□ -1
CLCN6-202ENST00000346436 IFITM10A6NMD0 228 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 SNAI2O43623 268 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 NDUFB8O95169 186 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 LEPROTL1O95214 131 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 DEFB130BP0DP73 79 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 DEFB130AP0DP74 79 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 Q8TCH9 128 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 TMEM242Q9NWH2 141 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 UQCR10Q9UDW1 63 aa8.83□□□□□ -1
CLCN6-202ENST00000346436 FER1L6-AS1Q8NA97 138 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 SMIM12Q96EX1 92 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 KLK15Q9H2R5 256 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 C15orf62A8K5M9 175 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 CKS1BP61024 79 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 NDUFAF3Q9BU61 184 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 BPTFQ12830 3046 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 SLAQ13239 276 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 Q6ZS49 121 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 OR11H1Q8NG94 326 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 FGF23Q9GZV9 251 aaPredicted RBP8.82□□□□□ -1
CLCN6-202ENST00000346436 UBE2E2Q96LR5 201 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 Q9H3A6 140 aa8.82□□□□□ -1
CLCN6-202ENST00000346436 A0A1B0GWJ7 208 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 A6NDN8 102 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 PEX7O00628 323 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 LINC00477Q96M19 166 aa8.81□□□□□ -1
CLCN6-202ENST00000346436 SPTBN1Q01082 2364 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms