RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 TAX1BP3O14907 124 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 Q6P435 159 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 LCNL1Q6ZST4 164 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 SMPXQ9UHP9 88 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 KLF12Q9Y4X4 402 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 ZNF815PA8K554 130 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 IGLC1P0CG04 106 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 Q9H3A6 140 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 CRXO43186 299 aaPredicted RBP12.68□□□□□ -0.38
SRPK1-201ENST00000346162 MGST2Q99735 147 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 ZFHX2Q9C0A1 2572 aaPredicted RBP12.68□□□□□ -0.38
SRPK1-201ENST00000346162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.68□□□□□ -0.38
SRPK1-201ENST00000346162 WIPF3A6NGB9 483 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 C16orf92Q96LL3 132 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 SLC25A15Q9Y619 301 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 DLX6P56179 175 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 SRSF6Q13247 344 aaKnown RBP12.68□□□□□ -0.38
SRPK1-201ENST00000346162 PRSS57Q6UWY2 283 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 AMTNQ6UX39 209 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 ZC2HC1AQ96GY0 325 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 LIME1Q9H400 295 aa12.68□□□□□ -0.38
SRPK1-201ENST00000346162 NXT2Q9NPJ8 142 aaKnown RBP12.68□□□□□ -0.38
SRPK1-201ENST00000346162 CGB1A6NKQ9 187 aa12.67□□□□□ -0.38
SRPK1-201ENST00000346162 G3V4G9 280 aa12.67□□□□□ -0.38
SRPK1-201ENST00000346162 C20orf204Q6ZNR8 217 aa12.67□□□□□ -0.38
SRPK1-201ENST00000346162 SLC25A48Q6ZT89 311 aaKnown RBP12.67□□□□□ -0.38
SRPK1-201ENST00000346162 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
SRPK1-201ENST00000346162 SPACA3Q8IXA5 215 aa12.67□□□□□ -0.38
SRPK1-201ENST00000346162 OTORQ9NRC9 128 aa12.67□□□□□ -0.38
SRPK1-201ENST00000346162 CD177Q8N6Q3 437 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 SCRT1Q9BWW7 348 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 NOTCH3Q9UM47 2321 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 D6R8Y8 96 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 RSPO1Q2MKA7 263 aaPredicted RBP12.66□□□□□ -0.38
SRPK1-201ENST00000346162 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 V9GYV3 84 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 IGHG3P01860 377 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 RNASE6Q93091 150 aaKnown RBP12.66□□□□□ -0.38
SRPK1-201ENST00000346162 NPFFR1Q9GZQ6 430 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 S4R3C0 116 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 GTF3C1Q12789 2109 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 PLXNB3Q9ULL4 1909 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 HTN1P15515 57 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 PRCDQ00LT1 54 aa12.66□□□□□ -0.38
SRPK1-201ENST00000346162 PRB3Q04118 309 aaPredicted RBP12.66□□□□□ -0.38
SRPK1-201ENST00000346162 MLNRO43193 412 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 C9orf153Q5TBE3 101 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 SH2D6Q7Z4S9 175 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 COPS9Q8WXC6 57 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 LINC00479Q96M42 142 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 JMJD8Q96S16 334 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
SRPK1-201ENST00000346162 TEX45Q8NA69 505 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 TMEM133Q9H2Q1 129 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 PHLDA3Q9Y5J5 127 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 PPIFP30405 207 aaKnown RBP12.65□□□□□ -0.38
SRPK1-201ENST00000346162 NTF4P34130 210 aa12.65□□□□□ -0.38
SRPK1-201ENST00000346162 NEU4Q8WWR8 484 aaPredicted RBP12.65□□□□□ -0.38
SRPK1-201ENST00000346162 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.39
SRPK1-201ENST00000346162 LYNX1P0DP58 116 aa12.65□□□□□ -0.39
SRPK1-201ENST00000346162 CD69Q07108 199 aa12.65□□□□□ -0.39
SRPK1-201ENST00000346162 IGHV1-24A0A0C4DH33 117 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 IFITM1P13164 125 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 KIR2DL4Q99706 377 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 FOXA2Q9Y261 457 aaPredicted RBP12.64□□□□□ -0.39
SRPK1-201ENST00000346162 PPP1R17O96001 155 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 ATP5J2P56134 94 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 EBLN2Q6P2I7 272 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 CLUHP3Q96NS8 147 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 CIRBPQ14011 172 aaKnown RBP12.64□□□□□ -0.39
SRPK1-201ENST00000346162 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 FAM53AQ6NSI3 398 aaPredicted RBP12.64□□□□□ -0.39
SRPK1-201ENST00000346162 TRBV20-1A0A075B6N2 111 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 IGKV1-6A0A0C4DH72 117 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 ID1P41134 155 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 OR10J6PQ8NGY7 276 aa12.64□□□□□ -0.39
SRPK1-201ENST00000346162 TRAV2A0A0B4J234 112 aa12.63□□□□□ -0.39
SRPK1-201ENST00000346162 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
SRPK1-201ENST00000346162 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
SRPK1-201ENST00000346162 ERG28Q9UKR5 140 aa12.63□□□□□ -0.39
SRPK1-201ENST00000346162 MBD3L4A6NDZ8 208 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-201ENST00000346162 MBD3L3A6NE82 208 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-201ENST00000346162 MBD3L5A6NJ08 208 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-201ENST00000346162 LMO1P25800 156 aa12.63□□□□□ -0.39
SRPK1-201ENST00000346162 MBD3L2Q8NHZ7 208 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-201ENST00000346162 LINC00473A8K010 186 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 IGKV3-15P01624 115 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 PPP1R27Q86WC6 154 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 EDA2RQ9HAV5 297 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 C9JAW5 83 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 K7ERJ3 54 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 NCR2O95944 276 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 CD24P25063 80 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 LY6EQ16553 131 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 TMEM190Q8WZ59 177 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 C21orf62Q9NYP8 219 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms