RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZNF705GA8MUZ8 300 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-202ENST00000345734 TMEM250H0YL14 139 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 I3L2K1 104 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 CCL25O15444 150 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 AMBPP02760 352 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 FAM106CPP0CH98 169 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 PATE2Q6UY27 113 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 ZNF562Q6V9R5 426 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 BRD3OSQ6XYD6 125 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 Q8N9W7 124 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 ARPC1AQ92747 370 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 SRSF8Q9BRL6 282 aaKnown RBP7.27□□□□□ -1.25
ATG4A-202ENST00000345734 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 PARLQ9H300 379 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 SDF2L1Q9HCN8 221 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 SMPXQ9UHP9 88 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 NAV2Q8IVL1 2488 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 CORTO00230 105 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 TRGC1P0CF51 173 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 SCGB2A2Q13296 93 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 ELOBQ15370 118 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 PDZD11Q5EBL8 140 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 TMEM116Q8NCL8 245 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 OR4X1Q8NH49 305 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 UHRF2Q96PU4 802 aa7.27□□□□□ -1.25
ATG4A-202ENST00000345734 TECRQ9NZ01 308 aaKnown RBP7.27□□□□□ -1.25
ATG4A-202ENST00000345734 SOX21Q9Y651 276 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-202ENST00000345734 IGHV7-81A0A0B4J1V7 117 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 TRAV40A0A0B4J280 105 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 IGHV1-69DA0A0B4J2H0 117 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 K7EIM0 57 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 K7ERU9 68 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 COX7A2P2O60397 106 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 IGHV1-69P01742 117 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 IGHV4-38-2P0DP08 117 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 PSG3Q16557 428 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 CLEC12BQ2HXU8 276 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 TEX38Q6PEX7 206 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 TCF24Q7RTU0 167 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 TMEM18Q96B42 140 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 FAM167A-AS1Q96KT0 104 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 TRGV9Q99603 122 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 HSPB9Q9BQS6 159 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 DERL1Q9BUN8 251 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 C19orf24Q9BVV8 132 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 SLC25A2Q9BXI2 301 aa7.26□□□□□ -1.25
ATG4A-202ENST00000345734 A0A1B0GV72 72 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 SH2D7A6NKC9 451 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-202ENST00000345734 ZNF785A8K8V0 405 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 F6UZH7 168 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 OR7C2O60412 319 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 NDUFB4O95168 129 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 MSMBP08118 114 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 OR10J4P0C629 311 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 C8orf88P0DMB2 117 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 EGR2P11161 476 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-202ENST00000345734 ORM2P19652 201 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 C10orf113Q5VZT2 155 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 ZNF705AQ6ZN79 300 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-202ENST00000345734 NAT8Q9UHE5 227 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 S4R3C0 116 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 PDE6DO43924 150 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 ADIRFQ15847 76 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 TIGITQ495A1 244 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 OR1L4Q8NGR5 311 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 OR1B1Q8NGR6 318 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 MRPL32Q9BYC8 188 aaKnown RBP7.25□□□□□ -1.25
ATG4A-202ENST00000345734 ZNF355PQ9NSJ1 428 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 C1RLQ9NZP8 487 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 NAGKQ9UJ70 344 aa7.25□□□□□ -1.25
ATG4A-202ENST00000345734 NPIPB5A8MRT5 1133 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 TRGC2P03986 189 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 IGLC1P0CG04 106 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 PYYP10082 97 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 DSCR9P59020 149 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 TAS2R45P59539 299 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 RPL23P62829 140 aaKnown RBP7.24□□□□□ -1.25
ATG4A-202ENST00000345734 PNRC1Q12796 327 aaPredicted RBP7.24□□□□□ -1.25
ATG4A-202ENST00000345734 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 ZNF343Q6P1L6 599 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 PQLC2Q6ZP29 291 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 LINC00305Q7Z4B0 112 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 TMEM219Q86XT9 240 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 TTC9CQ8N5M4 171 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 OR5AU1Q8NGC0 362 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 OR1L6Q8NGR2 347 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 Q8WTZ3 238 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 RASL11BQ9BPW5 248 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 TMEM167BQ9NRX6 74 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 HIF1ANQ9NWT6 349 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 CLEC5AQ9NY25 188 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 TEX15Q9BXT5 2789 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 HELZ2Q9BYK8 2649 aaKnown RBP7.24□□□□□ -1.25
ATG4A-202ENST00000345734 IGLV11-55A0A075B6I3 123 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 TRAV30A0A087WSZ9 112 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 LINC01548A6NM66 108 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 IGKV1-17P01599 117 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 HLA-DRB1P01911 266 aa7.24□□□□□ -1.25
ATG4A-202ENST00000345734 MAPK1IP1LQ8NDC0 245 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms