RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 KMT2EQ8IZD2 1858 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 IGHV1-3A0A0C4DH29 117 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 ZNF207O43670 478 aaKnown RBP12.54□□□□□ -0.4
PTPRU-201ENST00000345512 DIAPH2-AS1Q14236 149 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 MS4A6AQ9H2W1 248 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 ARFGEF3Q5TH69 2177 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 ZNF833PQ6ZTB9 187 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 TPSG1Q9NRR2 321 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 CPAMD8Q8IZJ3 1885 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 NPIPB5A8MRT5 1133 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 D6R8Y8 96 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 HBDP02042 147 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 DLX1P56177 255 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 ARPC1AQ92747 370 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 METTL26Q96S19 204 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 NAA38Q9BRA0 125 aaKnown RBP12.53□□□□□ -0.4
PTPRU-201ENST00000345512 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.53□□□□□ -0.4
PTPRU-201ENST00000345512 A0A1B0GWJ7 208 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 GAGE1Q13065 139 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
PTPRU-201ENST00000345512 ARMS2P0C7Q2 107 aa12.52□□□□□ -0.4
PTPRU-201ENST00000345512 Q86TA4 180 aa12.52□□□□□ -0.4
PTPRU-201ENST00000345512 HIST1H4GQ99525 98 aa12.52□□□□□ -0.4
PTPRU-201ENST00000345512 TDGF1P13385 188 aa12.52□□□□□ -0.4
PTPRU-201ENST00000345512 PPIFP30405 207 aaKnown RBP12.52□□□□□ -0.4
PTPRU-201ENST00000345512 Q6ZVH6 145 aa12.52□□□□□ -0.4
PTPRU-201ENST00000345512 SMIM13P0DJ93 91 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 DDB2Q92466 427 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 FXYD5Q96DB9 178 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 IGLV3-9A0A075B6K5 115 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 A0A1W2PNU3 283 aaPredicted RBP12.52□□□□□ -0.41
PTPRU-201ENST00000345512 SFTPCP11686 197 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 LYZL1Q6UWQ5 148 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 FOXC2Q99958 501 aa12.52□□□□□ -0.41
PTPRU-201ENST00000345512 IGKV1OR2-108A0A075B7D4 117 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 WISP2O76076 250 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 CNTFRP26992 372 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 ZNF502Q8TBZ5 544 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 IFI27L1Q96BM0 104 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 SPCS1Q9Y6A9 102 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 DLX6P56179 175 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 UBTD1Q9HAC8 227 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 NCR2O95944 276 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 NUP37Q8NFH4 326 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 SPRY4Q9C004 299 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■□□ 19.2
PTPRU-201ENST00000345512 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-201ENST00000345512 IGKV2D-40P01614 121 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-201ENST00000345512 GUSBP1Q15486 140 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 Q1RN00 199 aa12.51□□□□□ -0.41
PTPRU-201ENST00000345512 BDP1A6H8Y1 2624 aa12.5□□□□□ -0.41
PTPRU-201ENST00000345512 LEPP41159 167 aa12.5□□□□□ -0.41
PTPRU-201ENST00000345512 A0A0G2JNJ9 132 aa12.5□□□□□ -0.41
PTPRU-201ENST00000345512 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
PTPRU-201ENST00000345512 Q9UFV3 132 aa12.5□□□□□ -0.41
PTPRU-201ENST00000345512 LAMA3Q16787 3333 aa12.49□□□□□ -0.41
PTPRU-201ENST00000345512 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
PTPRU-201ENST00000345512 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
PTPRU-201ENST00000345512 TECTAO75443 2155 aa12.49□□□□□ -0.41
PTPRU-201ENST00000345512 RANBP2P49792 3224 aaKnown RBP12.49□□□□□ -0.41
PTPRU-201ENST00000345512 RAB9AP51151 201 aa12.49□□□□□ -0.41
PTPRU-201ENST00000345512 SEC11AP67812 179 aa12.49□□□□□ -0.41
PTPRU-201ENST00000345512 AMN1Q8IY45 258 aa12.49□□□□□ -0.41
PTPRU-201ENST00000345512 EVI2AP22794 236 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 IFI27P40305 119 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-201ENST00000345512 EBLN2Q6P2I7 272 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 Q6ZS92 163 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 GFRA4Q9GZZ7 299 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 ZNF492Q9P255 531 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 BUB1B-PAK6H3BSN5 160 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 CT83Q5H943 113 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 FAM71F2Q6NXP2 309 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 Q8TAT8 98 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 PHLDA3Q9Y5J5 127 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 PSG3Q16557 428 aa12.48□□□□□ -0.41
PTPRU-201ENST00000345512 LHBP01229 141 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 UTF1Q5T230 341 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 ATG2AQ2TAZ0 1938 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 HERVK_113P61574 105 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 FAM215AQ9Y5M1 114 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 PLXNB1O43157 2135 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 MSMPQ1L6U9 139 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 LOC107984156A0A0G2JMH3 177 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 M0R381 172 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 TMEM155Q4W5P6 130 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 TEX36Q5VZQ5 186 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 IGFL4Q6B9Z1 124 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 ARL17AQ8IVW1 177 aa12.47□□□□□ -0.41
PTPRU-201ENST00000345512 EIF4EBP1Q13541 118 aaPredicted RBP12.46□□□□□ -0.41
PTPRU-201ENST00000345512 NOTCH3Q9UM47 2321 aa12.46□□□□□ -0.41
PTPRU-201ENST00000345512 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
PTPRU-201ENST00000345512 OR4X2Q8NGF9 303 aa12.46□□□□□ -0.41
PTPRU-201ENST00000345512 FAM231BA6NCW3 169 aa12.46□□□□□ -0.42
PTPRU-201ENST00000345512 OR11H12B2RN74 326 aa12.46□□□□□ -0.42
PTPRU-201ENST00000345512 ATP5LO75964 103 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms