RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 UBE2DNLQ8IWF7 75 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 C1orf147Q96MC9 270 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 A0A1W2PPI3 338 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 PUSL1Q8N0Z8 303 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 CTSZQ9UBR2 303 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 E9PQ18 207 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 SCRT1Q9BWW7 348 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 ELANEP08246 267 aa13.19□□□□□ -0.3
SMARCA4-201ENST00000344626 OR11H1Q8NG94 326 aa13.19□□□□□ -0.3
SMARCA4-201ENST00000344626 CRXO43186 299 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-201ENST00000344626 LINC00477Q96M19 166 aa13.19□□□□□ -0.3
SMARCA4-201ENST00000344626 HOXB4P17483 251 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-201ENST00000344626 C12orf57Q99622 126 aa13.19□□□□□ -0.3
SMARCA4-201ENST00000344626 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 SRIP30626 198 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 MGST2Q99735 147 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 TRAV9-1A0A075B6T8 112 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 PRELID3AQ96N28 172 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 M0R143 59 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 STAG3L2P0CL84 134 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 STAG3L3P0CL85 134 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 KRTAP27-1Q3LI81 207 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 LYPD1Q8N2G4 141 aa13.18□□□□□ -0.3
SMARCA4-201ENST00000344626 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 MMP23AO75900 390 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 NDUFB8O95169 186 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 MDKP21741 143 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 FBLN7Q53RD9 439 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 TMEM14BQ9NUH8 114 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 TMEM131Q92545 1883 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 ACTL10Q5JWF8 245 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 WFDC1Q9HC57 220 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 INAFM1C9JVW0 142 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 NDUFA4L2Q9NRX3 87 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 NPIPB5A8MRT5 1133 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 LHBP01229 141 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 CNTFRP26992 372 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 TMEM136Q6ZRR5 245 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 ANAPC10Q9UM13 185 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 C15orf62A8K5M9 175 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 SPRNQ5BIV9 151 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 GCSAMLQ5JQS6 135 aa13.17□□□□□ -0.3
SMARCA4-201ENST00000344626 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 ALKBH7Q9BT30 221 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 H3BUA1 57 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 TRGC2P03986 189 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 C11orf53Q8IXP5 236 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 KLK15Q9H2R5 256 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 IFITM10A6NMD0 228 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 INSP01308 110 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 ZNF138P52744 262 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 YPEL3P61236 119 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 TGIF2-C20orf24A0A0A6YYL0 155 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 CIRBPQ14011 172 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-201ENST00000344626 F2Z2F3 143 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 PSMB2P49721 201 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 ACANP16112 2415 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 DIRC3C9JPN6 131 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 OR11H6Q8NGC7 330 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 UBE2E2Q96LR5 201 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 HECTD1Q9ULT8 2610 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 VAMP3Q15836 100 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 KIAA1549LQ6ZVL6 1849 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 TMEM50AO95807 157 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 Q8NFD4 153 aa13.15□□□□□ -0.3
SMARCA4-201ENST00000344626 RIPPLY3P57055 190 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 SLC17A3O00476 420 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 FCN3O75636 299 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 AMBPP02760 352 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 SUMO2P61956 95 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 ZNF415Q09FC8 603 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 IGFBPL1Q8WX77 278 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 DYSFO75923 2080 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 PRSS2P07478 247 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 PRADC1Q9BSG0 188 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 RFNGQ9Y644 331 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 LGALS3P17931 250 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 OR10J3Q5JRS4 329 aa13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 PARD6GQ9BYG4 376 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-201ENST00000344626 NRN1Q9NPD7 142 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 OSTCQ9NRP0 149 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 J3QR89 54 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 ORMDL3Q8N138 153 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 TMEM95Q3KNT9 176 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 KIAA1644Q3SXP7 199 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 TMEM183AQ8IXX5 376 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 RCHY1Q96PM5 261 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 SHANK2-AS3Q9BTD1 123 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 ST20Q9HBF5 79 aa13.13□□□□□ -0.31
SMARCA4-201ENST00000344626 IGKV2-40A0A087WW87 121 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-201ENST00000344626 MUC21A0A0G2JKD1 596 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms