RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 IGKV1-13P0DP09 117 aa10.07□□□□□ -0.8
TRIOBP-202ENST00000344404 Q6AWC8 147 aa10.07□□□□□ -0.8
TRIOBP-202ENST00000344404 C14orf178Q8N769 122 aaPredicted RBP10.07□□□□□ -0.8
TRIOBP-202ENST00000344404 SERF1AO75920 110 aa10.07□□□□□ -0.8
TRIOBP-202ENST00000344404 DKK1O94907 266 aa10.07□□□□□ -0.8
TRIOBP-202ENST00000344404 PAX9P55771 341 aa10.07□□□□□ -0.8
TRIOBP-202ENST00000344404 C20orf204Q6ZNR8 217 aa10.07□□□□□ -0.8
TRIOBP-202ENST00000344404 NCKAP5O14513 1909 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 TMEM14DPA8MWL7 114 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 C5orf24Q7Z6I8 188 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 NRGNQ92686 78 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 TMEM144Q7Z5S9 345 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 C2orf16Q68DN1 1984 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 PMVKQ15126 192 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 LYPD2Q6UXB3 125 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 PPP1R3EQ9H7J1 279 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 ACACAQ13085 2346 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 PQLC2LA1A4F0 135 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 C5orf47Q569G3 176 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 GAGE7O76087 117 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 LINC00205P59089 165 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 KLK9Q9UKQ9 250 aa10.06□□□□□ -0.8
TRIOBP-202ENST00000344404 IGKV1OR2-108A0A075B7D4 117 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 A0A087WV48 116 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 IGHV1-3A0A0C4DH29 117 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 LINC01590Q5TEZ4 76 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 IGHV4-4A0A075B6R2 117 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 D6R8Y8 96 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 CTHRC1Q96CG8 243 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 MST1P26927 711 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 GAGE6Q13070 117 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 TPTE2P1Q5T6R2 138 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 ZNF497Q6ZNH5 498 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 A0A1B0GW15 77 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 SAA4P35542 130 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 WBP1Q96G27 269 aa10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 ZFP36L1Q07352 338 aaKnown RBP10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 PAQR4Q8N4S7 273 aaPredicted RBP10.05□□□□□ -0.8
TRIOBP-202ENST00000344404 NMBP08949 121 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 USF3Q68DE3 2245 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 YPEL1O60688 119 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 CR1LQ2VPA4 569 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 YPEL2Q96QA6 119 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 KLF5Q13887 457 aaPredicted RBP10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 LINC00518Q8N0U6 118 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 RPRMLQ8N4K4 120 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 IFI27L1Q96BM0 104 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 RPL23P62829 140 aaKnown RBP10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 ZNF479Q96JC4 524 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 MMP23AO75900 390 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 TBX6O95947 436 aaPredicted RBP10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 NR2C2APQ86WQ0 139 aa10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 RBM38Q9H0Z9 239 aaKnown RBP10.04□□□□□ -0.8
TRIOBP-202ENST00000344404 F2Z2F3 143 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 IGHV1-8P0DP01 117 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 MRPL14Q6P1L8 145 aaKnown RBP10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 LINC00587B1AMM8 73 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 J3QW42 95 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 K7ENP7 123 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 SPINK13Q1W4C9 94 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 FAM90A1Q86YD7 464 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 TIMM17AQ99595 171 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 IGKV2D-24A0A075B6R9 120 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 NCOR1O75376 2440 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 TCTEX1D4Q5JR98 221 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 ZFAND6Q6FIF0 208 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 ATRXP46100 2492 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 RASL11AQ6T310 242 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 SPATA31B1PQ5VZV4 182 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 SIGMAR1Q99720 223 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 MCRIP2Q9BUT9 160 aaKnown RBP10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 ZNF319Q9P2F9 582 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 IFITM3Q01628 133 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 VWA8A3KMH1 1905 aa10.03□□□□□ -0.8
TRIOBP-202ENST00000344404 A0A0J9YY99 117 aa10.02□□□□□ -0.8
TRIOBP-202ENST00000344404 ATP5IP56385 69 aaPredicted RBP10.02□□□□□ -0.8
TRIOBP-202ENST00000344404 SMIM2Q9BVW6 85 aa10.02□□□□□ -0.8
TRIOBP-202ENST00000344404 PLXNA4Q9HCM2 1894 aa10.02□□□□□ -0.8
TRIOBP-202ENST00000344404 IGHG3P01860 377 aa10.02□□□□□ -0.81
TRIOBP-202ENST00000344404 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.81
TRIOBP-202ENST00000344404 LYZL1Q6UWQ5 148 aa10.02□□□□□ -0.81
TRIOBP-202ENST00000344404 ATP6V0BQ99437 205 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms