RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 H3BTX0 84 aa14.58□□□□□ -0.08
HOXA9-201ENST00000343483 IL4P05112 153 aa14.58□□□□□ -0.08
HOXA9-201ENST00000343483 NBEAP1P0C6P0 100 aa14.58□□□□□ -0.08
HOXA9-201ENST00000343483 GNG5P63218 68 aa14.58□□□□□ -0.08
HOXA9-201ENST00000343483 C5orf56Q8N8D9 126 aa14.58□□□□□ -0.08
HOXA9-201ENST00000343483 MRPL27Q9P0M9 148 aaKnown RBP14.58□□□□□ -0.08
HOXA9-201ENST00000343483 FBXL7Q9UJT9 491 aa14.58□□□□□ -0.08
HOXA9-201ENST00000343483 A0A1B0GUS0 222 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 SLC25A5P05141 298 aaKnown RBP14.57□□□□□ -0.08
HOXA9-201ENST00000343483 FRMD6-AS1P0C7T7 363 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 TCL1AP56279 114 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 RPL19P84098 196 aaKnown RBP14.57□□□□□ -0.08
HOXA9-201ENST00000343483 BAGE2Q86Y30 109 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 OR5R1Q8NH85 324 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 RNF125Q96EQ8 232 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 LINC01548A6NM66 108 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 ZNF705GA8MUZ8 300 aaPredicted RBP14.57□□□□□ -0.08
HOXA9-201ENST00000343483 SNURFLB1AK76 121 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 F8W735 103 aaPredicted RBP14.57□□□□□ -0.08
HOXA9-201ENST00000343483 SPINK4O60575 86 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 SLC25A16P16260 332 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 ZNF600Q6ZNG1 722 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 TMEM256Q8N2U0 113 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 ZNF491Q8N8L2 437 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 EPDR1Q9UM22 224 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 MOB4Q9Y3A3 225 aa14.57□□□□□ -0.08
HOXA9-201ENST00000343483 SOX21Q9Y651 276 aaPredicted RBP14.57□□□□□ -0.08
HOXA9-201ENST00000343483 TRBV9A0A0B4J1U6 114 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 GRIFINA4D1Z8 144 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 PGPA6NDG6 321 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 OR2T8A6NH00 312 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 GZMBP10144 247 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 FAM110DQ8TAY7 271 aaPredicted RBP14.56□□□□□ -0.08
HOXA9-201ENST00000343483 PIFOQ8TCI5 191 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 ZNF48Q96MX3 618 aaPredicted RBP14.56□□□□□ -0.08
HOXA9-201ENST00000343483 MAST4O15021 2626 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 G3V318 75 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 GNB1LQ9BYB4 327 aa14.56□□□□□ -0.08
HOXA9-201ENST00000343483 TRAV20A0A0B4J274 112 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 SMIM27A0A1W2PRY6 76 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 UBE2G1P62253 170 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 SLC35B1P78383 322 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 TMEM183BQ1AE95 376 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 SHANK2-AS3Q9BTD1 123 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 MEGF9Q9H1U4 602 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 RPH3ALQ9UNE2 315 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 AKAP9Q99996 3911 aa14.55□□□□□ -0.08
HOXA9-201ENST00000343483 C9orf152Q5JTZ5 239 aa14.54□□□□□ -0.08
HOXA9-201ENST00000343483 WI2-2373I1.2A0A1W2PRP0 233 aa14.54□□□□□ -0.08
HOXA9-201ENST00000343483 CA1P00915 261 aaPredicted RBP14.54□□□□□ -0.08
HOXA9-201ENST00000343483 FOSL1P15407 271 aa14.54□□□□□ -0.08
HOXA9-201ENST00000343483 CRISP2P16562 243 aa14.54□□□□□ -0.08
HOXA9-201ENST00000343483 C15orf32Q32M92 178 aa14.54□□□□□ -0.08
HOXA9-201ENST00000343483 WDR73Q6P4I2 378 aa14.54□□□□□ -0.08
HOXA9-201ENST00000343483 TMEM14CQ9P0S9 112 aa14.54□□□□□ -0.08
HOXA9-201ENST00000343483 ANKRD17O75179 2603 aaKnown RBP14.53□□□□□ -0.08
HOXA9-201ENST00000343483 H3BRN7 92 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 NUPR1O60356 82 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 RHOGP84095 191 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 USF2Q15853 346 aaPredicted RBP14.53□□□□□ -0.08
HOXA9-201ENST00000343483 FAM231DQ6ZW35 169 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 Q9H3A6 140 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 NAT8BQ9UHF3 227 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 CCDC168Q8NDH2 2452 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 GATCO43716 136 aaKnown RBP14.53□□□□□ -0.08
HOXA9-201ENST00000343483 SCGB2A1O75556 95 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 AVPP01185 164 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 FCGR2BP31994 310 aaPredicted RBP14.53□□□□□ -0.08
HOXA9-201ENST00000343483 LY6EQ16553 131 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 PRR27Q6MZM9 219 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 SGK494Q96LW2 274 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 ZNF586Q9NXT0 402 aa14.53□□□□□ -0.08
HOXA9-201ENST00000343483 H3BUX3 64 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 MT-ND6P03923 174 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 AMY1AP04745 511 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 COX19Q49B96 90 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 MRPL54Q6P161 138 aaKnown RBP14.52□□□□□ -0.09
HOXA9-201ENST00000343483 BPIFA4PQ86YQ2 179 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 BCL6BQ8N143 479 aaPredicted RBP14.52□□□□□ -0.09
HOXA9-201ENST00000343483 C5orf17Q8NAS9 161 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 MAPK1IP1LQ8NDC0 245 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 CMTM2Q8TAZ6 248 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 TMEM68Q96MH6 324 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 ATG101Q9BSB4 218 aa14.52□□□□□ -0.09
HOXA9-201ENST00000343483 ZFHX3Q15911 3703 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 IZUMO1RA6ND01 250 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 CTSGP08311 255 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 HIST1H1EP10412 219 aaKnown RBP14.51□□□□□ -0.09
HOXA9-201ENST00000343483 GATA3P23771 443 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 RAB4BP61018 213 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 PKIAP61925 76 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 TMEM136Q6ZRR5 245 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 LINC01356Q8N9X3 169 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 NUDT10Q8NFP7 164 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 VN1R17PQ8TDU5 208 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 NUDT11Q96G61 164 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 CHRDL1Q9BU40 450 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 TP53TG3Q9ULZ0 132 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 KLF12Q9Y4X4 402 aa14.51□□□□□ -0.09
HOXA9-201ENST00000343483 GRAMD2BQ96HH9 432 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms