RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 OR8A1Q8NGG7 326 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 SRSF12Q8WXF0 261 aaKnown RBP7.69□□□□□ -1.18
HOXA1-201ENST00000343060 GUCD1Q96NT3 240 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 HIGD1AQ9Y241 93 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 H3BTX0 84 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 CACNG7P62955 275 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 SAMD13Q5VXD3 122 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 NAA38Q9BRA0 125 aaKnown RBP7.68□□□□□ -1.18
HOXA1-201ENST00000343060 HIGD1BQ9P298 99 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 TIMM8BQ9Y5J9 83 aaPredicted RBP7.68□□□□□ -1.18
HOXA1-201ENST00000343060 KNTC1P50748 2209 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 SHISA9B4DS77 424 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 HBDP02042 147 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 FABP2P12104 132 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 VMA21Q3ZAQ7 101 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 TNFRSF14Q92956 283 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 ZNF414Q96IQ9 312 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 SMPXQ9UHP9 88 aa7.68□□□□□ -1.18
HOXA1-201ENST00000343060 TIMM23BQ5SRD1 257 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 TPSG1Q9NRR2 321 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 D6R8Y8 96 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 IGHV1-46P01743 117 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 ZNF883P0CG24 379 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 CRIP1P50238 77 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 TNFAIP6P98066 277 aaPredicted RBP7.67□□□□□ -1.18
HOXA1-201ENST00000343060 TMEM164Q5U3C3 297 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 PRSS57Q6UWY2 283 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 PCP2Q8IVA1 136 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 TDHQ8IZJ6 230 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 EXOC3-AS1Q8N2X6 119 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 SLC25A39Q9BZJ4 359 aaPredicted RBP7.67□□□□□ -1.18
HOXA1-201ENST00000343060 PROCRQ9UNN8 238 aa7.67□□□□□ -1.18
HOXA1-201ENST00000343060 LINC01546A6NGU7 62 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 VSTM5A8MXK1 200 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 ORMDL3Q8N138 153 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 LYPD1Q8N2G4 141 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 DEFB108BQ8NET1 73 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 PHLDA1Q8WV24 401 aaPredicted RBP7.66□□□□□ -1.18
HOXA1-201ENST00000343060 IFI27L1Q96BM0 104 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 RITA1Q96K30 269 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 TRBV19A0A075B6N1 114 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 SLC25A17O43808 307 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 HES3Q5TGS1 186 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 SIGLEC15Q6ZMC9 328 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 FOXI2Q6ZQN5 318 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 RAB37Q96AX2 223 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 PSG8Q9UQ74 426 aa7.66□□□□□ -1.18
HOXA1-201ENST00000343060 INTS1Q8N201 2190 aaKnown RBP7.65□□□□□ -1.18
HOXA1-201ENST00000343060 TEX48A0A1B0GUV7 120 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 CRYGBP07316 175 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 SMIM13P0DJ93 91 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 HLA-DRB4P13762 266 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 CCL11P51671 97 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 DIAPH2-AS1Q14236 149 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 C1orf185Q5T7R7 199 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 HCP5Q6MZN7 132 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 ZMAT4Q9H898 229 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 HLA-DRB4X5D2U9 266 aa7.65□□□□□ -1.18
HOXA1-201ENST00000343060 WI2-2373I1.2A0A1W2PRP0 233 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 M0R1B8 84 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 NDUFS7O75251 213 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 FCN3O75636 299 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 CCL3L1P16619 93 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 TNFRSF1AP19438 455 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 MC5RP33032 325 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 RPL27AP46776 148 aaKnown RBP7.64□□□□□ -1.19
HOXA1-201ENST00000343060 COX8CQ7Z4L0 72 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 F11RQ9Y624 299 aaKnown RBP7.64□□□□□ -1.19
HOXA1-201ENST00000343060 NBEAQ8NFP9 2946 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 PPIAL4EA0A075B759 164 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 PPIAL4CA0A0B4J2A2 164 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 H3BRN7 92 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 K7EM74 188 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 K7EQM0 130 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 NKX2-8O15522 239 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 FTH1P19P0C7X4 201 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 PPIAL4FP0DN26 164 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 FCGR2BP31994 310 aaPredicted RBP7.64□□□□□ -1.19
HOXA1-201ENST00000343060 FXYD2P54710 66 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 LYZP61626 148 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 MRPL51Q4U2R6 128 aaKnown RBP7.64□□□□□ -1.19
HOXA1-201ENST00000343060 ATP1A1-AS1Q5TC04 95 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 VGLL1Q99990 258 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 SHANK2-AS3Q9BTD1 123 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 SCNM1Q9BWG6 230 aa7.64□□□□□ -1.19
HOXA1-201ENST00000343060 MRPS12O15235 138 aaKnown RBP7.63□□□□□ -1.19
HOXA1-201ENST00000343060 NMUP48645 174 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 TMEM200BQ69YZ2 307 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 AMN1Q8IY45 258 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 C18orf15Q96N68 181 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 NGBQ9NPG2 151 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 SELENOKQ9Y6D0 94 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 TMEM213A2RRL7 107 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 LYZL1Q6UWQ5 148 aa7.63□□□□□ -1.19
HOXA1-201ENST00000343060 TM2D2Q9BX73 214 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms