RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 IGKV2-40A0A087WW87 121 aaPredicted RBP10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 IGKV2D-40P01614 121 aaPredicted RBP10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 FABP2P12104 132 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 RIPPLY3P57055 190 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 RNF125Q96EQ8 232 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 MAP1LC3AQ9H492 121 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 PEF1Q9UBV8 284 aaKnown RBP10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 BMI1P35226 326 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 LINC00527Q9UJ94 153 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 LOC107984156A0A0G2JMH3 177 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 A0A1W2PNU3 283 aaPredicted RBP10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 SYS1-DBNDD2H3BUS1 97 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 ARMS2P0C7Q2 107 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 DAZAP2Q15038 168 aaPredicted RBP10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 ARL17AQ8IVW1 177 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 M0R381 172 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 COL25A1Q9BXS0 654 aaPredicted RBP10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 SLC25A39Q9BZJ4 359 aaPredicted RBP10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 DPM3Q9P2X0 92 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 HCFC1P51610 2035 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 D6R8Y8 96 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 PRR20EP86478 221 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 PRR20CP86479 221 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 PRR20DP86480 221 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 PRR20BP86481 221 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 PRR20AP86496 221 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 ORMDL3Q8N138 153 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 C21orf62Q9NYP8 219 aa10.05□□□□□ -0.8
SNRNP48-201ENST00000342415 KLRD1Q13241 179 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 C8orf46Q8TAG6 207 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 FOXC2Q99958 501 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 C1RLQ9NZP8 487 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 IGKV1OR2-108A0A075B7D4 117 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 H7C2G1 150 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 LY96Q9Y6Y9 160 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 DSCAML1Q8TD84 2053 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 H3BVH4 76 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 FAM57AQ8TBR7 257 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 SLC25A2Q9BXI2 301 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 IGKV3-20P01619 116 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 WT1P19544 449 aaPredicted RBP10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 ADIPOQQ15848 244 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 MEGF9Q9H1U4 602 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
SNRNP48-201ENST00000342415 IGHG3P01860 377 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 APOBEC3AP31941 199 aaPredicted RBP10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 FER1L6-AS1Q8NA97 138 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 USP9YO00507 2555 aaPredicted RBP10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 KMT2EQ8IZD2 1858 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 LOC105371242A0A075B767 164 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 GUSBP1Q15486 140 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 LYZL1Q6UWQ5 148 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 TEX43Q6ZNM6 134 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 CFHR2P36980 270 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 UBE2V1Q13404 147 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 MSMPQ1L6U9 139 aa10.03□□□□□ -0.8
SNRNP48-201ENST00000342415 KIAA1549Q9HCM3 1950 aa10.02□□□□□ -0.8
SNRNP48-201ENST00000342415 IGHV2-26A0A0B4J1V2 119 aa10.02□□□□□ -0.8
SNRNP48-201ENST00000342415 LY6EQ16553 131 aa10.02□□□□□ -0.8
SNRNP48-201ENST00000342415 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.8
SNRNP48-201ENST00000342415 NDUFA4L2Q9NRX3 87 aa10.02□□□□□ -0.8
SNRNP48-201ENST00000342415 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
SNRNP48-201ENST00000342415 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
SNRNP48-201ENST00000342415 KIR2DL5BA0A0G2JN68 375 aa10.02□□□□□ -0.81
SNRNP48-201ENST00000342415 KIR2DL5BA0A0G2JPC4 375 aa10.02□□□□□ -0.81
SNRNP48-201ENST00000342415 CCDC144NLQ6NUI1 221 aa10.02□□□□□ -0.81
SNRNP48-201ENST00000342415 KIR2DL5AQ8N109 375 aa10.02□□□□□ -0.81
SNRNP48-201ENST00000342415 SPCS1Q9Y6A9 102 aa10.02□□□□□ -0.81
SNRNP48-201ENST00000342415 PDLIM4P50479 330 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 GLMPQ8WWB7 406 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 CHODLQ9H9P2 273 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 NHP2Q9NX24 153 aaKnown RBP10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 SIGLEC9Q9Y336 463 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 IGHV1-3A0A0C4DH29 117 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 TMEM213A2RRL7 107 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 E7EUB6 86 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 NDUFA3O95167 84 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 LEPP41159 167 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 C11orf52Q96A22 123 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 ZC2HC1AQ96GY0 325 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 TP73-AS1Q9UF72 201 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 COX11Q9Y6N1 276 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 B9A039 149 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 TGFAP01135 160 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 SAPCD1Q5SSQ6 148 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 EBLN2Q6P2I7 272 aa10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 MRPL27Q9P0M9 148 aaKnown RBP10.01□□□□□ -0.81
SNRNP48-201ENST00000342415 PF4V1P10720 104 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 OR5AN1Q8NGI8 311 aa10□□□□□ -0.81
SNRNP48-201ENST00000342415 WFDC12Q8WWY7 111 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms