RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 DLX6P56179 175 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 FOXL1Q12952 345 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 ZNF833PQ6ZTB9 187 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 OR52E5Q8NH55 327 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 HIF1ANQ9NWT6 349 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 UNC79Q9P2D8 2635 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 H3BTX0 84 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 CEACAM3P40198 252 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 PAX2Q02962 417 aa10.44□□□□□ -0.74
COL18A1-201ENST00000342220 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.44□□□□□ -0.74
COL18A1-201ENST00000342220 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
COL18A1-201ENST00000342220 TAX1BP3O14907 124 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 ORM2P19652 201 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 NTF3P20783 257 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 OSR1Q8TAX0 266 aaPredicted RBP10.43□□□□□ -0.74
COL18A1-201ENST00000342220 NPVFQ9HCQ7 196 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 CDC42EP3Q9UKI2 254 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 AMMECR1Q9Y4X0 333 aaPredicted RBP10.43□□□□□ -0.74
COL18A1-201ENST00000342220 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
COL18A1-201ENST00000342220 A0A1B0GV72 72 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 SLC17A3O00476 420 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 GPX1P07203 203 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 GCHFRP30047 84 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 MC5RP33032 325 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 STPG3Q8N7X2 389 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 OR5AN1Q8NGI8 311 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 NPIPB3Q92617 1050 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 UHRF2Q96PU4 802 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 RBP4P02753 201 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
COL18A1-201ENST00000342220 PPP1R27Q86WC6 154 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 OR10G8Q8NGN5 311 aa10.43□□□□□ -0.74
COL18A1-201ENST00000342220 LMO4P61968 165 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 PSG9Q00887 426 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 SMAGPQ0VAQ4 97 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 FN1P02751 2386 aaKnown RBP10.42□□□□□ -0.74
COL18A1-201ENST00000342220 K7EN84 100 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 C3orf79P0CE67 100 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 PRTN3P24158 256 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 TEPPQ6URK8 271 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 IL17RELQ6ZVW7 336 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 PDPNQ86YL7 162 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 VSTM2AQ8TAG5 236 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 OR10J4P0C629 311 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 USF1P22415 310 aaPredicted RBP10.42□□□□□ -0.74
COL18A1-201ENST00000342220 FXYD3Q14802 87 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 PSG5Q15238 335 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 FAM19A2Q8N3H0 131 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 STXBP6Q8NFX7 210 aa10.42□□□□□ -0.74
COL18A1-201ENST00000342220 UBR5O95071 2799 aaPredicted RBP10.41□□□□□ -0.74
COL18A1-201ENST00000342220 A0A1W2PPI3 338 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 NUDT3O95989 172 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 IGLV1-47P01700 117 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 EAF1Q96JC9 268 aaPredicted RBP10.41□□□□□ -0.74
COL18A1-201ENST00000342220 GTSF1LQ9H1H1 148 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 MT-CO2P00403 227 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 IGHV4-38-2P0DP08 117 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 ZNF90Q03938 601 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 RAB31Q13636 194 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 OR1B1Q8NGR6 318 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 TXNDC17Q9BRA2 123 aa10.41□□□□□ -0.74
COL18A1-201ENST00000342220 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 IER3P46695 156 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 RHOBP62745 196 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 SRSF12Q8WXF0 261 aaKnown RBP10.4□□□□□ -0.74
COL18A1-201ENST00000342220 SORL1Q92673 2214 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 NF1P21359 2839 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
COL18A1-201ENST00000342220 MUC21Q5SSG8 566 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 OR4F17Q8NGA8 305 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 GNB4Q9HAV0 340 aa10.4□□□□□ -0.74
COL18A1-201ENST00000342220 MRPL27Q9P0M9 148 aaKnown RBP10.4□□□□□ -0.74
COL18A1-201ENST00000342220 SERTM2A0A1B0GWG4 89 aa10.4□□□□□ -0.75
COL18A1-201ENST00000342220 OR5B3Q8NH48 314 aa10.4□□□□□ -0.75
COL18A1-201ENST00000342220 TMEM14BQ9NUH8 114 aa10.4□□□□□ -0.75
COL18A1-201ENST00000342220 SIGLEC9Q9Y336 463 aa10.4□□□□□ -0.75
COL18A1-201ENST00000342220 TEP1Q99973 2627 aaKnown RBP10.39□□□□□ -0.75
COL18A1-201ENST00000342220 IGHV3OR16-13A0A075B7E8 117 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 IGHV3-74A0A0B4J1X5 117 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 TRAV8-6A0A0B4J262 113 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 G3V4G9 280 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 SPINK4O60575 86 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 Q56UQ5 140 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 SNURFLB1AK76 121 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 ESDP10768 282 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 HOXB4P17483 251 aaPredicted RBP10.39□□□□□ -0.75
COL18A1-201ENST00000342220 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
COL18A1-201ENST00000342220 PRCDQ00LT1 54 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 MMD2Q8IY49 270 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 SLC25A33Q9BSK2 321 aa10.39□□□□□ -0.75
COL18A1-201ENST00000342220 FOXA2Q9Y261 457 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms