RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SRSF8Q9BRL6 282 aaKnown RBP12.4□□□□□ -0.42
COL11A2-201ENST00000341947 TRBV6-6A0A0A6YYG2 114 aa12.4□□□□□ -0.42
COL11A2-201ENST00000341947 DICER1Q9UPY3 1922 aaKnown RBP12.4□□□□□ -0.42
COL11A2-201ENST00000341947 OVOL3O00110 214 aa12.4□□□□□ -0.42
COL11A2-201ENST00000341947 GAGE13Q4V321 117 aa12.4□□□□□ -0.42
COL11A2-201ENST00000341947 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
COL11A2-201ENST00000341947 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
COL11A2-201ENST00000341947 GAS1P54826 345 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 RUSC1-AS1Q66K80 236 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 ANAPC13Q9BS18 74 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 ICE1Q9Y2F5 2266 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 LOC285556D6RIA3 1793 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 LY6HO94772 140 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 PRTN3P24158 256 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 TMEM14EPQ6UXP3 125 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 NDUFAF3Q9BU61 184 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 LINC00473A8K010 186 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 LINC01619G3V211 115 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 DEFB131AP59861 70 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 TRAV1-1A0A0B4J248 108 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 E7EQL1 145 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 HIST1H4AP62805 103 aaKnown RBP12.39□□□□□ -0.43
COL11A2-201ENST00000341947 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
COL11A2-201ENST00000341947 NMSQ5H8A3 153 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 RPRMLQ8N4K4 120 aa12.39□□□□□ -0.43
COL11A2-201ENST00000341947 A0A087WWL8 130 aa12.38□□□□□ -0.43
COL11A2-201ENST00000341947 AMBPP02760 352 aa12.38□□□□□ -0.43
COL11A2-201ENST00000341947 B3GALT5-AS1P59052 145 aa12.38□□□□□ -0.43
COL11A2-201ENST00000341947 VWC2LB2RUY7 222 aa12.38□□□□□ -0.43
COL11A2-201ENST00000341947 DMRTC2Q8IXT2 367 aaPredicted RBP12.38□□□□□ -0.43
COL11A2-201ENST00000341947 RP1P56715 2156 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 PRR31Q5SQ13 230 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 HGFACQ04756 655 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 FAM90A2PQ658T7 463 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 A0A1B0GW64 132 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 NTF4P34130 210 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 ANAPC10Q9UM13 185 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 DOCK4Q8N1I0 1966 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 DAD1P61803 113 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 GAGE2EQ4V326 116 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 Q96MF0 132 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 GAGE2DQ9UEU5 116 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 GLRX5Q86SX6 157 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 LINC01551Q86U37 167 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 BMPERQ8N8U9 685 aa12.37□□□□□ -0.43
COL11A2-201ENST00000341947 TRBV24-1A0A075B6N3 115 aa12.36□□□□□ -0.43
COL11A2-201ENST00000341947 UBE2E1P51965 193 aa12.36□□□□□ -0.43
COL11A2-201ENST00000341947 ZNF562Q6V9R5 426 aa12.36□□□□□ -0.43
COL11A2-201ENST00000341947 KLF12Q9Y4X4 402 aa12.36□□□□□ -0.43
COL11A2-201ENST00000341947 TRPT1Q86TN4 253 aaKnown RBP12.36□□□□□ -0.43
COL11A2-201ENST00000341947 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
COL11A2-201ENST00000341947 TMEM158Q8WZ71 300 aa12.36□□□□□ -0.43
COL11A2-201ENST00000341947 PRIMA1Q86XR5 153 aa12.36□□□□□ -0.43
COL11A2-201ENST00000341947 RNASE2P10153 161 aaKnown RBP12.36□□□□□ -0.43
COL11A2-201ENST00000341947 F5H768 121 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 FAM110DQ8TAY7 271 aaPredicted RBP12.35□□□□□ -0.43
COL11A2-201ENST00000341947 SHANK2-AS3Q9BTD1 123 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 K7ENP7 123 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 RPL32P62910 135 aaKnown RBP12.35□□□□□ -0.43
COL11A2-201ENST00000341947 BCL6BQ8N143 479 aaPredicted RBP12.35□□□□□ -0.43
COL11A2-201ENST00000341947 DNAJC30Q96LL9 226 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 MDC1Q14676 2089 aaKnown RBP12.35□□□□□ -0.43
COL11A2-201ENST00000341947 HAPLN4Q86UW8 402 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 A0A0G2JMZ2 1700 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 LRRC37A2A6NM11 1700 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 ZNF561-AS1K7EIQ3 104 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 LIME1Q9H400 295 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 PDCD11Q14690 1871 aaKnown RBP12.35□□□□□ -0.43
COL11A2-201ENST00000341947 GUSBP1Q15486 140 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 RPP25LQ8N5L8 163 aaKnown RBP12.35□□□□□ -0.43
COL11A2-201ENST00000341947 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
COL11A2-201ENST00000341947 C5orf63A6NC05 138 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 A6NNC1 897 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 IL17RELQ6ZVW7 336 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 CHD5Q8TDI0 1954 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 CXCL1P09341 107 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 Q86TA4 180 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 IGHV1-69DA0A0B4J2H0 117 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 IGHV1-69P01742 117 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 C2orf82Q6UX34 121 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 E9PQ18 207 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 FNDC10F2Z333 226 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 ATP6V0E1O15342 81 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 CYTL1Q9NRR1 136 aa12.34□□□□□ -0.43
COL11A2-201ENST00000341947 UBE2CO00762 179 aa12.33□□□□□ -0.44
COL11A2-201ENST00000341947 SPXQ9BT56 116 aa12.33□□□□□ -0.44
COL11A2-201ENST00000341947 XCL2Q9UBD3 114 aa12.33□□□□□ -0.44
COL11A2-201ENST00000341947 C15orf62A8K5M9 175 aa12.33□□□□□ -0.44
COL11A2-201ENST00000341947 PDE6HQ13956 83 aa12.33□□□□□ -0.44
COL11A2-201ENST00000341947 TRAV8-1A0A0A6YYK1 113 aa12.33□□□□□ -0.44
COL11A2-201ENST00000341947 GATA4P43694 442 aa12.33□□□□□ -0.44
COL11A2-201ENST00000341947 PRR30Q53SZ7 412 aaPredicted RBP12.33□□□□□ -0.44
COL11A2-201ENST00000341947 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.44
COL11A2-201ENST00000341947 SPTBP11277 2137 aa12.32□□□□□ -0.44
COL11A2-201ENST00000341947 RHODO00212 210 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms