RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TMEM14EPQ6UXP3 125 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 OR10P1Q8NGE3 313 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 ASB13Q8WXK3 278 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 SLC25A32Q9H2D1 315 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 ELOA3CA0A087WX78 387 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-201ENST00000341472 C11orf94C9JXX5 98 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 CCSO14618 274 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 HYPMO75409 117 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 HLA-DMBP28068 263 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 DLK1P80370 383 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 OR4B1Q8NGF8 309 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 CLUHP3Q96NS8 147 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 GPR82Q96P67 336 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 NPVFQ9HCQ7 196 aa14.57□□□□□ -0.08
SYNE2-201ENST00000341472 hCG_2014768A0A024R1R8 64 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 TSC22D2O75157 780 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 CCNKO75909 580 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 BCAP31P51572 246 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 FXYD7P58549 80 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 RAP2BP61225 183 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 SELENOTP62341 195 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 LGALS9CQ6DKI2 356 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 OR11H7Q8NGC8 314 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 CHAC2Q8WUX2 184 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 RPRMQ9NS64 109 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 DOK5Q9P104 306 aa14.56□□□□□ -0.08
SYNE2-201ENST00000341472 A0A1B0GVG6 124 aa14.55□□□□□ -0.08
SYNE2-201ENST00000341472 FNDC10F2Z333 226 aa14.55□□□□□ -0.08
SYNE2-201ENST00000341472 TCTAP57738 103 aa14.55□□□□□ -0.08
SYNE2-201ENST00000341472 NMES1Q9C002 83 aa14.55□□□□□ -0.08
SYNE2-201ENST00000341472 HIGD1AQ9Y241 93 aa14.55□□□□□ -0.08
SYNE2-201ENST00000341472 IGLL5B9A064 214 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 F6UB75 175 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 SIX6O95475 246 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 MBPP02686 304 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-201ENST00000341472 CXCL3P19876 107 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 PSG9Q00887 426 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 S100A7AQ86SG5 101 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 C20orf173Q96LM9 149 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 C17orf77Q96MU5 243 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 SHANK2-AS3Q9BTD1 123 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 SCRT1Q9BWW7 348 aa14.54□□□□□ -0.08
SYNE2-201ENST00000341472 SLC25A39Q9BZJ4 359 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-201ENST00000341472 BIRC6Q9NR09 4857 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 L7N2F9 121 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 DEDDO75618 318 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 GIPP09681 153 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-201ENST00000341472 OR5G3P0C626 314 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 LINC00869P0C866 280 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 H2BFSP57053 126 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 PLP1P60201 277 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 VAMP2P63027 116 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 FAM78BQ5VT40 261 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 TEPPQ6URK8 271 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 ZNF705AQ6ZN79 300 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-201ENST00000341472 NEU1Q99519 415 aa14.53□□□□□ -0.08
SYNE2-201ENST00000341472 RCL1Q9Y2P8 373 aaKnown RBP14.53□□□□□ -0.08
SYNE2-201ENST00000341472 TRAV10A0A0B4J240 114 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 A0A0J9YX75 114 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 SMIM9A6NGZ8 99 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 H3BRN7 92 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 RPL7P18124 248 aaKnown RBP14.52□□□□□ -0.09
SYNE2-201ENST00000341472 FGL1Q08830 312 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 IL15RAQ13261 267 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 Q6ZTC4 211 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 GGACTQ9BVM4 153 aa14.52□□□□□ -0.09
SYNE2-201ENST00000341472 IGHV3OR16-12A0A075B7B8 117 aa14.51□□□□□ -0.09
SYNE2-201ENST00000341472 K7EPK0 472 aa14.51□□□□□ -0.09
SYNE2-201ENST00000341472 ARL16Q0P5N6 197 aa14.51□□□□□ -0.09
SYNE2-201ENST00000341472 C12orf74Q32Q52 190 aa14.51□□□□□ -0.09
SYNE2-201ENST00000341472 ZNF709Q8N972 641 aa14.51□□□□□ -0.09
SYNE2-201ENST00000341472 ARL6Q9H0F7 186 aa14.51□□□□□ -0.09
SYNE2-201ENST00000341472 SLC35B3Q9H1N7 401 aa14.51□□□□□ -0.09
SYNE2-201ENST00000341472 ZNF705FA8MVS1 300 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-201ENST00000341472 RLN2P04090 185 aa14.5□□□□□ -0.09
SYNE2-201ENST00000341472 ZNF705DP0CH99 300 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-201ENST00000341472 ZNF705BP0CI00 300 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-201ENST00000341472 SLC38A11Q08AI6 406 aa14.5□□□□□ -0.09
SYNE2-201ENST00000341472 IGFL4Q6B9Z1 124 aa14.5□□□□□ -0.09
SYNE2-201ENST00000341472 APLNQ9ULZ1 77 aa14.5□□□□□ -0.09
SYNE2-201ENST00000341472 RNF24Q9Y225 148 aa14.5□□□□□ -0.09
SYNE2-201ENST00000341472 GOLT1BQ9Y3E0 138 aa14.5□□□□□ -0.09
SYNE2-201ENST00000341472 LSM5Q9Y4Y9 91 aaKnown RBP14.5□□□□□ -0.09
SYNE2-201ENST00000341472 TRAV8-2A0A0B4J237 113 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 TMEM189A5PLL7 270 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 DUSP14O95147 198 aaKnown RBP14.49□□□□□ -0.09
SYNE2-201ENST00000341472 EMP1P54849 157 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 PXDC1Q5TGL8 231 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 PATE2Q6UY27 113 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 ZNF767PQ75MW2 155 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 RPP25LQ8N5L8 163 aaKnown RBP14.49□□□□□ -0.09
SYNE2-201ENST00000341472 CELA1Q9UNI1 258 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 RFNGQ9Y644 331 aa14.49□□□□□ -0.09
SYNE2-201ENST00000341472 SPART-AS1P0CW21 52 aa14.48□□□□□ -0.09
SYNE2-201ENST00000341472 PET100P0DJ07 73 aa14.48□□□□□ -0.09
SYNE2-201ENST00000341472 PVALBP20472 110 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-201ENST00000341472 ZNF546Q86UE3 836 aa14.48□□□□□ -0.09
SYNE2-201ENST00000341472 AKAP14Q86UN6 197 aa14.48□□□□□ -0.09
SYNE2-201ENST00000341472 PPP1R1CQ8WVI7 109 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms