RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
CAPRIN1-201ENST00000341394 FAM162BQ5T6X4 162 aa8.5□□□□□ -1.05
CAPRIN1-201ENST00000341394 A6NDN8 102 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 J3QR89 54 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 KIR2DS2P43631 304 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 PNKDQ8N490 385 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 GLMPQ8WWB7 406 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 HIST1H4GQ99525 98 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 A0A1W2PS18 150 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 CIDEAO60543 219 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 SLAQ13239 276 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 TMEM97Q5BJF2 176 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 Q6P435 159 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 NHP2Q9NX24 153 aaKnown RBP8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 NPIPB5A8MRT5 1133 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 NPIPB11E5RHQ5 1161 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 ADIPOQQ15848 244 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 C3orf36Q3SXR2 165 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 Q8TAT8 98 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 JKAMPQ9P055 326 aa8.49□□□□□ -1.05
CAPRIN1-201ENST00000341394 M0R381 172 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 IGHV1-46P01743 117 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 PRRX1P54821 245 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 VWC2Q2TAL6 325 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 Q9H3A6 140 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 RABAC1Q9UI14 185 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 JPT1Q9UK76 154 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 CENPEQ02224 2701 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 APOMO95445 188 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 LINC00614P0C842 121 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 FABP2P12104 132 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 APOBEC3AP31941 199 aaPredicted RBP8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 RELQ04864 619 aaPredicted RBP8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 FAM74A4Q5TZK3 123 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 TSKUQ8WUA8 353 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 TIMD4Q96H15 378 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 TRAV9-2A0A087WT02 112 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 NDUFA3O95167 84 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 TSPOP30536 169 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 NUP37Q8NFH4 326 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 NUP35Q8NFH5 326 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 TMEM242Q9NWH2 141 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 ZFP30Q9Y2G7 519 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 POLQO75417 2590 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 TRAV1-1A0A0B4J248 108 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 C17orf100A8MU93 164 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 E7EQL1 145 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 PRSS2P07478 247 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 FAM90A1Q86YD7 464 aa8.48□□□□□ -1.05
CAPRIN1-201ENST00000341394 JMJD1CQ15652 2540 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 SPRY2O43597 315 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 MMP23AO75900 390 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 ZNF788Q6ZQV5 615 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 TEX45Q8NA69 505 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 OR10AG1Q8NH19 301 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 SCRT1Q9BWW7 348 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 GTSF1LQ9H1H1 148 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 SPCS1Q9Y6A9 102 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 SMIM17P0DL12 118 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 OR4C13Q8NGP0 309 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 ZNF414Q96IQ9 312 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 TXNDC17Q9BRA2 123 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 TRBV20OR9-2A0A075B6H5 130 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 KBTBD11-OT1A0A1B0GTJ5 212 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 PMS2P5A8MQ11 134 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 ZNF134P52741 427 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 FOXC2Q99958 501 aa8.47□□□□□ -1.05
CAPRIN1-201ENST00000341394 IGLV3-9A0A075B6K5 115 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 FAM181BA6NEQ2 426 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 C15orf61A6NNL5 157 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 GPR183P32249 361 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 EMP1P54849 157 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 ZNF146Q15072 292 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 TMEM144Q7Z5S9 345 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 PRELID3AQ96N28 172 aa8.46□□□□□ -1.05
CAPRIN1-201ENST00000341394 A1L4Q6 167 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 B9A039 149 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 AREGP15514 252 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGLL1P15814 213 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 GCSAMQ8N6F7 178 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 BEND2Q8NDZ0 799 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 OR4A5Q8NH83 315 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 JMJD8Q96S16 334 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 SPOCK3Q9BQ16 436 aa8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 RPP21Q9H633 154 aaKnown RBP8.46□□□□□ -1.06
CAPRIN1-201ENST00000341394 NBPF19A0A087WUL8 3843 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 K7EN84 100 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 SRD5A1P18405 259 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 COX19Q49B96 90 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 C11orf53Q8IXP5 236 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 ANAPC10Q9UM13 185 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 RAI1Q7Z5J4 1906 aaPredicted RBP8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 LMO1P25800 156 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 SSBP2P81877 361 aaPredicted RBP8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 MYOZ3Q8TDC0 251 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms