RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 FER1L6-AS1Q8NA97 138 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 Q96M66 194 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FAM103A1Q9BTL3 118 aaKnown RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV8-4A0A0B4J246 113 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 CELA2BP08218 269 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FAM27E3Q08E93 113 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 C16orf54Q6UWD8 224 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 C20orf78Q9BR46 151 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 H3BUA1 57 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 CX3CL1P78423 397 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 IGLV3-21P80748 117 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FOXF2Q12947 444 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 PIP4P1Q86T03 277 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FGFRL1Q8N441 504 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ZC2HC1AQ96GY0 325 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV8-7A0A075B6U6 113 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ZIC3O60481 467 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 LAGE3Q14657 143 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 Q6ZS92 163 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ZNHIT1O43257 154 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TFPI2P48307 235 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 LILRA3Q8N6C8 439 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 NPIPB3Q92617 1050 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TCF19Q9Y242 345 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV8-6A0A0B4J262 113 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 IGHV2-70P01814 119 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 PRTN3P24158 256 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF672Q499Z4 452 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TRGV9Q99603 122 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ACANP16112 2415 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TRBV5-7A0A0A0MS05 114 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FAM223BA6NKX1 122 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM14DPA8MWL7 114 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 VSIG8P0DPA2 414 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 COX6A1P12074 109 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 MP68P56378 58 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ZIC1Q15915 447 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 CGB2Q6NT52 195 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FAM223AQ8IWN6 122 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 SLC22A18ASQ8N1D0 253 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 GATD1Q8NB37 220 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 UCN2Q96RP3 112 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 SMAD5-AS1Q9Y6J3 95 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 DLEU1O43261 78 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 RFPL3SP0C7P2 107 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ESDP10768 282 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 CCL18P55774 89 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FAM219BQ5XKK7 198 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 MIC13Q5XKP0 118 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM256Q8N2U0 113 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 C10orf105Q8TEF2 133 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 H3BT86 120 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FGF16O43320 207 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 CCL1P22362 96 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 EGR4Q05215 589 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 ZFP36L1Q07352 338 aaKnown RBP2.73□□□□□ -1.97
CSMD3-202ENST00000339701 MPV17L2Q567V2 206 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 FOXC2Q99958 501 aa2.73□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV5A0A0B4J249 113 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1B0GW54 56 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 PEX7O00628 323 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 FOXF1Q12946 379 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 SLC25A53Q5H9E4 307 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 PYGO2Q9BRQ0 406 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 ZNF319Q9P2F9 582 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GAGE12JA6NER3 117 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GAGE7O76087 117 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 NDUFB4O95168 129 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 TOMM40O96008 361 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 WNT1P04628 370 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GAGE12FP0CL80 117 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GAGE12GP0CL81 117 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GAGE12IP0CL82 117 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GAGE4Q13068 117 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 LCNL1Q6ZST4 164 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 J3KT08 172 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 M0R1W7 72 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 IGKCP01834 107 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 CDKN1BP46527 198 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 CKS1BP61024 79 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM99Q8N816 258 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 MRGPRFQ96AM1 343 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 CTHRC1Q96CG8 243 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 C21orf62Q9NYP8 219 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 A0A087WX48 190 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 IGHV2OR16-5A0A0B4J2B6 119 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 hADV29S1A0JD25 119 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GAGE12BA1L429 117 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 FCMRO60667 390 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 TCRAP04437 139 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 CTLA4P16410 223 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 RND2P52198 227 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 GCSAMLQ5JQS6 135 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 TTTY10Q9BZA0 68 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 NOTCH4Q99466 2003 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 CRLF1O75462 422 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 CXCL1P09341 107 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 BTCP35070 178 aa2.72□□□□□ -1.97
CSMD3-202ENST00000339701 IGFL3Q6UXB1 125 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms