RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PROCRQ9UNN8 238 aa7.73□□□□□ -1.17
PTCHD4-201ENST00000339488 F5H768 121 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 TCL1BO95988 128 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 SRSF2Q01130 221 aaKnown RBP7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 C2orf27AQ580R0 203 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 C15orf53Q8NAA6 179 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 NPIPB3Q92617 1050 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 DNAJC30Q96LL9 226 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 SLC25A2Q9BXI2 301 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 CALYQ9NYX4 217 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 HHLA3Q9XRX5 114 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 COL5A1P20908 1838 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 HLA-DRB4P13762 266 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 TMEM78Q5T7P6 136 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 SMRP1Q8NCR6 262 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 SLC25A10Q9UBX3 287 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 HLA-DRB4X5D2U9 266 aa7.72□□□□□ -1.17
PTCHD4-201ENST00000339488 PTPRBP23467 1997 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 C9JAW5 83 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 HBDP02042 147 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 PRSS1P07477 247 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 TNFRSF1AP19438 455 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 MZT1Q08AG7 82 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 TMEM155Q4W5P6 130 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 HIGD1AQ9Y241 93 aa7.71□□□□□ -1.17
PTCHD4-201ENST00000339488 DOCK10Q96BY6 2186 aa7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 A8MWV9 139 aa7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 LINC01565O15544 149 aa7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 CXCL12P48061 93 aa7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 CRIP2P52943 208 aaPredicted RBP7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 SUMO3P55854 103 aaPredicted RBP7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 AMN1Q8IY45 258 aa7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 FOXC2Q99958 501 aa7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 ZNF576Q9H609 170 aa7.71□□□□□ -1.18
PTCHD4-201ENST00000339488 TM4SF5O14894 197 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 HOXA3O43365 443 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 THBDP07204 575 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 SRYQ05066 204 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 PIP4P1Q86T03 277 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 OR1L4Q8NGR5 311 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM167A-AS1Q96KT0 104 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 TRAV40A0A0B4J280 105 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 TNFRSF6BO95407 300 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 C6orf15Q6UXA7 325 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 MGAQ8IWI9 3026 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 F5P12259 2224 aa7.7□□□□□ -1.18
PTCHD4-201ENST00000339488 ABCA1O95477 2261 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 TMEM213A2RRL7 107 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 NPFFO15130 113 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 SDK1Q7Z5N4 2213 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A10PA6NDY2 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A20PA6NIJ5 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A7PA6NKC0 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A22PA8MWA6 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A12PA8MX19 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A5PA8MXJ8 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A23PA8MXZ1 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A15PP0C7V4 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A13PP0C7W8 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A14PP0C7W9 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 FAM90A24PP0C7X0 464 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 EMP1P54849 157 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 TMEM101Q96IK0 257 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 ODF3Q96PU9 254 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 PIMREGQ9BSJ6 248 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 MDFICQ9P1T7 246 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 ASXL3Q9C0F0 2248 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 PGPA6NDG6 321 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 GAS8-AS1O95177 125 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 IGKCP01834 107 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 SSR4P51571 173 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 GFERP55789 205 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 RPS21P63220 83 aaKnown RBP7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 SRSF12Q8WXF0 261 aaKnown RBP7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 PAXXQ9BUH6 204 aa7.69□□□□□ -1.18
PTCHD4-201ENST00000339488 TRBV7-3A0A075B6L6 115 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 C12orf77C9JDV5 145 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 HERVK_113P63121 156 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 C10orf128Q5T292 105 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 C9orf153Q5TBE3 101 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 HRCT1Q6UXD1 115 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 DCTN5Q9BTE1 182 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 TMEM126AQ9H061 195 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 NDUFA3O95167 84 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 IGLC6P0CF74 106 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 FOXC1Q12948 553 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 EIF4EBP1Q13541 118 aaPredicted RBP7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 SLC25A53Q5H9E4 307 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 CEMP1Q6PRD7 247 aaPredicted RBP7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 TRPT1Q86TN4 253 aaKnown RBP7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 NTN5Q8WTR8 489 aaPredicted RBP7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 PRSS22Q9GZN4 317 aa7.68□□□□□ -1.18
PTCHD4-201ENST00000339488 FREM1Q5H8C1 2179 aa7.67□□□□□ -1.18
PTCHD4-201ENST00000339488 A0A1B0GUT8 65 aa7.67□□□□□ -1.18
PTCHD4-201ENST00000339488 NPIPB11E5RHQ5 1161 aa7.67□□□□□ -1.18
PTCHD4-201ENST00000339488 WIPF1O43516 503 aa7.67□□□□□ -1.18
PTCHD4-201ENST00000339488 NGFP01138 241 aa7.67□□□□□ -1.18
PTCHD4-201ENST00000339488 NPYP01303 97 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms