RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.38□□□□□ -0.59
PCDH8-201ENST00000338862 IGF2BP2-AS1Q96M15 143 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
PCDH8-201ENST00000338862 K7EMI3 77 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 FTH1P19P0C7X4 201 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 VWC2LB2RUY7 222 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 C16orf97H3BN30 126 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 IFI27P40305 119 aaPredicted RBP11.37□□□□□ -0.59
PCDH8-201ENST00000338862 TMEM249Q2WGJ8 235 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 ZNF788Q6ZQV5 615 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 Q8TAT8 98 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 GTSF1Q8WW33 167 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 MEGF9Q9H1U4 602 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 MRPL27Q9P0M9 148 aaKnown RBP11.37□□□□□ -0.59
PCDH8-201ENST00000338862 LINC00312Q9Y6C7 94 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 IGHV2-26A0A0B4J1V2 119 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 CTRLP40313 264 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 KLK15Q9H2R5 256 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
PCDH8-201ENST00000338862 M0R296 226 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 GUSBP1Q15486 140 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 GUCD1Q96NT3 240 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 TMEM213A2RRL7 107 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 EVI2AP22794 236 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 PSG9Q00887 426 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 SCGB2A2Q13296 93 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 C1orf162Q8NEQ5 155 aaPredicted RBP11.36□□□□□ -0.59
PCDH8-201ENST00000338862 D6R8Y8 96 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 GFRALQ6UXV0 394 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 SMIM15Q7Z3B0 74 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 PNKDQ8N490 385 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 OR10AG1Q8NH19 301 aa11.36□□□□□ -0.59
PCDH8-201ENST00000338862 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
PCDH8-201ENST00000338862 GAGE12BA1L429 117 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 C22orf46C9J442 243 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 SFTA2Q6UW10 78 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 CHODLQ9H9P2 273 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 IGLC7A0M8Q6 106 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 FAM90A27PA6NNH2 459 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 K7ERU9 68 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 ESDP10768 282 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 ARL3P36405 182 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 SPRY4Q9C004 299 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 CST9LQ9H4G1 147 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 ZNF785A8K8V0 405 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 C17orf100A8MU93 164 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 TMEM133Q9H2Q1 129 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 DKK4Q9UBT3 224 aa11.35□□□□□ -0.59
PCDH8-201ENST00000338862 ADAMTS20P59510 1910 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 ZNF207O43670 478 aaKnown RBP11.34□□□□□ -0.59
PCDH8-201ENST00000338862 C1orf185Q5T7R7 199 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 IGKV2-40A0A087WW87 121 aaPredicted RBP11.34□□□□□ -0.59
PCDH8-201ENST00000338862 C2orf70A6NJV1 201 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 IGKV2D-40P01614 121 aaPredicted RBP11.34□□□□□ -0.59
PCDH8-201ENST00000338862 TMEM186Q96B77 213 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 PRELID3AQ96N28 172 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 K7EM74 188 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 FAM106CPP0CH98 169 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
PCDH8-201ENST00000338862 FAM106AQ4KMX7 169 aa11.34□□□□□ -0.59
PCDH8-201ENST00000338862 SAP30O75446 220 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 C8orf49Q96NF6 230 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
PCDH8-201ENST00000338862 DMXL1Q9Y485 3027 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 IGLV1-44P01699 117 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 BVES-AS1Q5T3Y7 98 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 FMC1Q96HJ9 113 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 SCNM1Q9BWG6 230 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 PSG8Q9UQ74 426 aa11.33□□□□□ -0.6
PCDH8-201ENST00000338862 MUC6Q6W4X9 2439 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 SORL1Q92673 2214 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 TRAV8-6A0A0B4J262 113 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 CSPG4Q6UVK1 2322 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 PRSS47A8MTI9 375 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 LYZL1Q6UWQ5 148 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 SEM1Q6ZVN7 128 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 LINC01560Q8TB33 94 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 TMEM167AQ8TBQ9 72 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 TM4SF5O14894 197 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 IGHG3P01860 377 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 MC5RP33032 325 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 SAPCD1Q5SSQ6 148 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 ZNF414Q96IQ9 312 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 PEF1Q9UBV8 284 aaKnown RBP11.32□□□□□ -0.6
PCDH8-201ENST00000338862 NCOR2Q9Y618 2525 aa11.32□□□□□ -0.6
PCDH8-201ENST00000338862 OCIAD2Q56VL3 154 aa11.31□□□□□ -0.6
PCDH8-201ENST00000338862 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
PCDH8-201ENST00000338862 LCNL1Q6ZST4 164 aa11.31□□□□□ -0.6
PCDH8-201ENST00000338862 LOXL1Q08397 574 aaPredicted RBP11.31□□□□□ -0.6
PCDH8-201ENST00000338862 GTF2H5Q6ZYL4 71 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms