RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 OR11H7Q8NGC8 314 aa17.21■□□□□ 0.35
CDKN3-202ENST00000335183 CIB3Q96Q77 187 aaPredicted RBP17.21■□□□□ 0.35
CDKN3-202ENST00000335183 TMEM147Q9BVK8 224 aa17.21■□□□□ 0.35
CDKN3-202ENST00000335183 DUSP14O95147 198 aaKnown RBP17.2■□□□□ 0.34
CDKN3-202ENST00000335183 AKR1C1Q04828 323 aa17.2■□□□□ 0.34
CDKN3-202ENST00000335183 TMEM182Q6ZP80 229 aaPredicted RBP17.2■□□□□ 0.34
CDKN3-202ENST00000335183 RNF182Q8N6D2 247 aa17.2■□□□□ 0.34
CDKN3-202ENST00000335183 PRSS46E5RG02 174 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 SYNGR2O43760 224 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 DEFB130BP0DP73 79 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 DEFB130AP0DP74 79 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 SLC25A6P12236 298 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 TNFSF8P32971 234 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 SPANXN5Q5MJ07 72 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 OR4D5Q8NGN0 318 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 GPR82Q96P67 336 aa17.19■□□□□ 0.34
CDKN3-202ENST00000335183 LYRM9A8MSI8 78 aa17.18■□□□□ 0.34
CDKN3-202ENST00000335183 H3BP45 60 aa17.18■□□□□ 0.34
CDKN3-202ENST00000335183 CRXO43186 299 aaPredicted RBP17.18■□□□□ 0.34
CDKN3-202ENST00000335183 S100A7P31151 101 aa17.18■□□□□ 0.34
CDKN3-202ENST00000335183 BAP18Q8IXM2 172 aa17.18■□□□□ 0.34
CDKN3-202ENST00000335183 LRTM2Q8N967 370 aa17.18■□□□□ 0.34
CDKN3-202ENST00000335183 RYR1P21817 5038 aa17.18■□□□□ 0.34
CDKN3-202ENST00000335183 TRAV8-2A0A0B4J237 113 aa17.17■□□□□ 0.34
CDKN3-202ENST00000335183 HOXB5P09067 269 aa17.17■□□□□ 0.34
CDKN3-202ENST00000335183 FAM3BP58499 235 aaPredicted RBP17.17■□□□□ 0.34
CDKN3-202ENST00000335183 ZNF738Q8NE65 137 aa17.17■□□□□ 0.34
CDKN3-202ENST00000335183 SOSTQ9BQB4 213 aa17.17■□□□□ 0.34
CDKN3-202ENST00000335183 SLIRPQ9GZT3 109 aaKnown RBP17.17■□□□□ 0.34
CDKN3-202ENST00000335183 TRAV12-2A0A075B6T6 113 aa17.16■□□□□ 0.34
CDKN3-202ENST00000335183 F5H768 121 aa17.16■□□□□ 0.34
CDKN3-202ENST00000335183 NOL3O60936 208 aaKnown RBP17.16■□□□□ 0.34
CDKN3-202ENST00000335183 NUDT3O95989 172 aa17.16■□□□□ 0.34
CDKN3-202ENST00000335183 ACOT7LQ6ZUV0 252 aa17.16■□□□□ 0.34
CDKN3-202ENST00000335183 TOMM5Q8N4H5 51 aa17.16■□□□□ 0.34
CDKN3-202ENST00000335183 SMCO3A2RU48 225 aa17.15■□□□□ 0.34
CDKN3-202ENST00000335183 SFT2D2O95562 160 aa17.15■□□□□ 0.34
CDKN3-202ENST00000335183 AP3S2P59780 193 aa17.15■□□□□ 0.34
CDKN3-202ENST00000335183 B2MP61769 119 aa17.15■□□□□ 0.34
CDKN3-202ENST00000335183 FCN2Q15485 313 aa17.15■□□□□ 0.34
CDKN3-202ENST00000335183 KRTAP4-5Q9BYR2 181 aa17.15■□□□□ 0.34
CDKN3-202ENST00000335183 SLC25A39Q9BZJ4 359 aaPredicted RBP17.15■□□□□ 0.34
CDKN3-202ENST00000335183 STRAPQ9Y3F4 350 aaKnown RBP17.15■□□□□ 0.34
CDKN3-202ENST00000335183 H3BRN7 92 aa17.14■□□□□ 0.33
CDKN3-202ENST00000335183 AZU1P20160 251 aa17.14■□□□□ 0.33
CDKN3-202ENST00000335183 RAP2BP61225 183 aa17.14■□□□□ 0.33
CDKN3-202ENST00000335183 TNP2Q05952 138 aa17.14■□□□□ 0.33
CDKN3-202ENST00000335183 PPP1R1AQ13522 171 aa17.14■□□□□ 0.33
CDKN3-202ENST00000335183 PYDC2Q56P42 97 aa17.14■□□□□ 0.33
CDKN3-202ENST00000335183 MCFD2Q8NI22 146 aa17.14■□□□□ 0.33
CDKN3-202ENST00000335183 H3BMQ9 156 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 BOLA2-SMG1P6H3BVE0 249 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 IL5P05113 134 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 TSPOP30536 169 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 RHOBP62745 196 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 HIST1H1AQ02539 215 aaPredicted RBP17.13■□□□□ 0.33
CDKN3-202ENST00000335183 CYP2G1PQ6ZSU1 146 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 TRIM63Q969Q1 353 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 LINC01587Q99440 93 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 PPP1R14DQ9NXH3 145 aa17.13■□□□□ 0.33
CDKN3-202ENST00000335183 NBDYA0A0U1RRE5 68 aa17.12■□□□□ 0.33
CDKN3-202ENST00000335183 TMEM144Q7Z5S9 345 aa17.12■□□□□ 0.33
CDKN3-202ENST00000335183 SLC25A21Q9BQT8 299 aaPredicted RBP17.12■□□□□ 0.33
CDKN3-202ENST00000335183 SHANK2-AS3Q9BTD1 123 aa17.12■□□□□ 0.33
CDKN3-202ENST00000335183 HIGD1AQ9Y241 93 aa17.12■□□□□ 0.33
CDKN3-202ENST00000335183 PLAC8L1A1L4L8 177 aa17.11■□□□□ 0.33
CDKN3-202ENST00000335183 C16orf90A8MZG2 172 aa17.11■□□□□ 0.33
CDKN3-202ENST00000335183 ATP5G1P05496 136 aa17.11■□□□□ 0.33
CDKN3-202ENST00000335183 OR5G3P0C626 314 aa17.11■□□□□ 0.33
CDKN3-202ENST00000335183 PRB4P10163 310 aaPredicted RBP17.11■□□□□ 0.33
CDKN3-202ENST00000335183 HTN1P15515 57 aa17.11■□□□□ 0.33
CDKN3-202ENST00000335183 RPL7P18124 248 aaKnown RBP17.11■□□□□ 0.33
CDKN3-202ENST00000335183 ATP5G3P48201 142 aa17.11■□□□□ 0.33
CDKN3-202ENST00000335183 ZNRF2Q8NHG8 242 aa17.11■□□□□ 0.33
CDKN3-202ENST00000335183 C6orf223Q8N319 242 aa17.1■□□□□ 0.33
CDKN3-202ENST00000335183 OR8A1Q8NGG7 326 aa17.1■□□□□ 0.33
CDKN3-202ENST00000335183 LRRC20Q8TCA0 184 aa17.1■□□□□ 0.33
CDKN3-202ENST00000335183 UHRF2Q96PU4 802 aa17.1■□□□□ 0.33
CDKN3-202ENST00000335183 ABCA13Q86UQ4 5058 aa17.09■□□□□ 0.33
CDKN3-202ENST00000335183 HYPMO75409 117 aa17.09■□□□□ 0.33
CDKN3-202ENST00000335183 LINC00869P0C866 280 aa17.09■□□□□ 0.33
CDKN3-202ENST00000335183 CCL18P55774 89 aa17.09■□□□□ 0.33
CDKN3-202ENST00000335183 PSENENQ9NZ42 101 aa17.09■□□□□ 0.33
CDKN3-202ENST00000335183 CXCL3P19876 107 aa17.08■□□□□ 0.32
CDKN3-202ENST00000335183 POLR2GP62487 172 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDKN3-202ENST00000335183 TMEM256Q8N2U0 113 aa17.08■□□□□ 0.32
CDKN3-202ENST00000335183 CBY3A6NI87 242 aa17.07■□□□□ 0.32
CDKN3-202ENST00000335183 ADAP1O75689 374 aa17.07■□□□□ 0.32
CDKN3-202ENST00000335183 TAS2R60P59551 318 aa17.07■□□□□ 0.32
CDKN3-202ENST00000335183 PSG3Q16557 428 aa17.07■□□□□ 0.32
CDKN3-202ENST00000335183 RNF141Q8WVD5 230 aa17.07■□□□□ 0.32
CDKN3-202ENST00000335183 C16orf74Q96GX8 76 aa17.07■□□□□ 0.32
CDKN3-202ENST00000335183 LINC00588Q9Y4M8 146 aa17.07■□□□□ 0.32
CDKN3-202ENST00000335183 RRAS2P62070 204 aaPredicted RBP17.06■□□□□ 0.32
CDKN3-202ENST00000335183 CLINT1Q14677 625 aa17.06■□□□□ 0.32
CDKN3-202ENST00000335183 RBM38Q9H0Z9 239 aaKnown RBP17.06■□□□□ 0.32
CDKN3-202ENST00000335183 TIMM8BQ9Y5J9 83 aaPredicted RBP17.06■□□□□ 0.32
CDKN3-202ENST00000335183 V9GYH0 126 aa17.06■□□□□ 0.32
CDKN3-202ENST00000335183 A0A087X0K7 114 aa17.05■□□□□ 0.32
CDKN3-202ENST00000335183 SSSCA1O60232 199 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms