RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ZNF674Q2M3X9 581 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 ARL6IP6Q8N6S5 226 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 OR1N2Q8NGR9 330 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 NPCDR1Q9BY65 106 aa12.63□□□□□ -0.39
SHOX-201ENST00000334060 IFITM10A6NMD0 228 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 APOHP02749 345 aaPredicted RBP12.62□□□□□ -0.39
SHOX-201ENST00000334060 ZNF616Q08AN1 781 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 PNRC1Q12796 327 aaPredicted RBP12.62□□□□□ -0.39
SHOX-201ENST00000334060 USF2Q15853 346 aaPredicted RBP12.62□□□□□ -0.39
SHOX-201ENST00000334060 AKR1C8PQ5T2L2 129 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 ETFRF1Q6IPR1 90 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 TEPPQ6URK8 271 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 DPPA3Q6W0C5 159 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 NDUFAF3Q9BU61 184 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 ZFAND3Q9H8U3 227 aa12.62□□□□□ -0.39
SHOX-201ENST00000334060 CCL24O00175 119 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 CYB5BO43169 146 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 HSPB1P04792 205 aaKnown RBP12.61□□□□□ -0.39
SHOX-201ENST00000334060 LINC00869P0C866 280 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 FCGR2BP31994 310 aaPredicted RBP12.61□□□□□ -0.39
SHOX-201ENST00000334060 MORN5Q5VZ52 161 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 TOMM20LQ6UXN7 152 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 NDUFA11Q86Y39 141 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
SHOX-201ENST00000334060 IGHV3-66A0A0C4DH42 116 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 GCGP01275 180 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 ATP6V0CP27449 155 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 FHL3Q13643 280 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 JOSD1Q15040 202 aaPredicted RBP12.61□□□□□ -0.39
SHOX-201ENST00000334060 TM4SF20Q53R12 229 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 CYP2G1PQ6ZSU1 146 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 TVP23CQ96ET8 276 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 UHRF2Q96PU4 802 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 SLC45A2Q9UMX9 530 aa12.61□□□□□ -0.39
SHOX-201ENST00000334060 HBE1P02100 147 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 NUTF2P61970 127 aaKnown RBP12.6□□□□□ -0.39
SHOX-201ENST00000334060 ELOBQ15370 118 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 ADAMTSL5Q6ZMM2 481 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 OR51G1Q8NGK1 321 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 ZNF320A2RRD8 509 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 RBFOX3A6NFN3 312 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 LINC01619G3V211 115 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BKO60814 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 IL4P05112 153 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BJP06899 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BOP23527 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BBP33778 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 TAGLN2P37802 199 aaKnown RBP12.6□□□□□ -0.39
SHOX-201ENST00000334060 ELLP55199 621 aaPredicted RBP12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BDP58876 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BCP62807 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 ZNF266Q14584 549 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST2H2BEQ16778 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.6□□□□□ -0.39
SHOX-201ENST00000334060 PATE2Q6UY27 113 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BHQ93079 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 TRGV9Q99603 122 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BNQ99877 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 HIST1H2BMQ99879 126 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 C20orf24Q9BUV8 137 aa12.6□□□□□ -0.39
SHOX-201ENST00000334060 GGCTO75223 188 aaKnown RBP12.59□□□□□ -0.39
SHOX-201ENST00000334060 RIPPLY3P57055 190 aa12.59□□□□□ -0.39
SHOX-201ENST00000334060 LYZP61626 148 aa12.59□□□□□ -0.39
SHOX-201ENST00000334060 ATP6V1FQ16864 119 aa12.59□□□□□ -0.39
SHOX-201ENST00000334060 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
SHOX-201ENST00000334060 LEMD1Q68G75 181 aa12.59□□□□□ -0.39
SHOX-201ENST00000334060 TXN2Q99757 166 aa12.59□□□□□ -0.39
SHOX-201ENST00000334060 NIPSNAP3BQ9BS92 247 aa12.59□□□□□ -0.39
SHOX-201ENST00000334060 A8MWP6 167 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 H3BQ15 152 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
SHOX-201ENST00000334060 RD3LP0DJH9 198 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 PRR20EP86478 221 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 PRR20CP86479 221 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 PRR20DP86480 221 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 PRR20BP86481 221 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 PRR20AP86496 221 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 SPATA31B1PQ5VZV4 182 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 TMEM37Q8WXS4 190 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 PXMP4Q9Y6I8 212 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 FNDC10F2Z333 226 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 TOMM40O96008 361 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 ORM2P19652 201 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 KLF5Q13887 457 aaPredicted RBP12.58□□□□□ -0.4
SHOX-201ENST00000334060 KHDC3LQ587J8 217 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
SHOX-201ENST00000334060 CTDSP1Q9GZU7 261 aa12.58□□□□□ -0.4
SHOX-201ENST00000334060 DFFBO76075 338 aa12.57□□□□□ -0.4
SHOX-201ENST00000334060 SCAF4O95104 1147 aaKnown RBP12.57□□□□□ -0.4
SHOX-201ENST00000334060 FHITP49789 147 aa12.57□□□□□ -0.4
SHOX-201ENST00000334060 SSX7Q7RTT5 188 aa12.57□□□□□ -0.4
SHOX-201ENST00000334060 TRBV24-1A0A075B6N3 115 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 TMEM213A2RRL7 107 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 IFNA5P01569 189 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 YPEL3P61236 119 aaPredicted RBP12.56□□□□□ -0.4
SHOX-201ENST00000334060 COA6Q5JTJ3 125 aaKnown RBP12.56□□□□□ -0.4
SHOX-201ENST00000334060 ZNF506Q5JVG8 444 aa12.56□□□□□ -0.4
SHOX-201ENST00000334060 OR1B1Q8NGR6 318 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms