RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 POM121L12Q8N7R1 296 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 SAMD10Q9BYL1 202 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 SLC25A39Q9BZJ4 359 aaPredicted RBP6.96□□□□□ -1.3
CPNE8-201ENST00000331366 MEGF9Q9H1U4 602 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
CPNE8-201ENST00000331366 CTSZQ9UBR2 303 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 PPIAL4EA0A075B759 164 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 PPIAL4DF5H284 164 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 SLC25A5P05141 298 aaKnown RBP6.96□□□□□ -1.3
CPNE8-201ENST00000331366 PPIAL4FP0DN26 164 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 HIGD1BQ9P298 99 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 ZNF580Q9UK33 172 aa6.96□□□□□ -1.3
CPNE8-201ENST00000331366 USF3Q68DE3 2245 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 MOSP00540 346 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 AMTP48728 403 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 SRSF6Q13247 344 aaKnown RBP6.95□□□□□ -1.3
CPNE8-201ENST00000331366 EDDM3AQ14507 147 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 DUX4L9Q6RFH8 374 aaPredicted RBP6.95□□□□□ -1.3
CPNE8-201ENST00000331366 UNQ5815/PRO19632Q6UWF5 114 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 TTC9CQ8N5M4 171 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 STPG4Q8N801 248 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 NEU4Q8WWR8 484 aaPredicted RBP6.95□□□□□ -1.3
CPNE8-201ENST00000331366 ACACBO00763 2458 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 MAP1AP78559 2803 aaPredicted RBP6.95□□□□□ -1.3
CPNE8-201ENST00000331366 IGHV3OR15-7A0A075B7D8 119 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 CENPVL3A0A0U1RRI6 287 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 ZNHIT1O43257 154 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 CD5LO43866 347 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 IGLC6P0CF74 106 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 UFSP1Q6NVU6 142 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 LINC00322Q6ZN03 302 aaPredicted RBP6.95□□□□□ -1.3
CPNE8-201ENST00000331366 LINC00305Q7Z4B0 112 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 NBEAP1P0C6P0 100 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 FTH1P19P0C7X4 201 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 COX8AP10176 69 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 FAM216BQ8N7L0 139 aa6.95□□□□□ -1.3
CPNE8-201ENST00000331366 ZNF318Q5VUA4 2279 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 A0A096LNJ9 63 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 BUB1B-PAK6H3BSN5 160 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 IGLL1P15814 213 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 HIST1H1AQ02539 215 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-201ENST00000331366 LHFPL4Q7Z7J7 247 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 CIARTQ8N365 385 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-201ENST00000331366 RPRMLQ8N4K4 120 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 MED13Q9UHV7 2174 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-201ENST00000331366 K7EIM0 57 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 SEC11AP67812 179 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 PSG3Q16557 428 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 SAMD13Q5VXD3 122 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 MOB3BQ86TA1 216 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 OR2T6Q8NHC8 308 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 BORCS7Q96B45 105 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 Q9H3A6 140 aa6.94□□□□□ -1.3
CPNE8-201ENST00000331366 TLN1Q9Y490 2541 aaKnown RBP6.93□□□□□ -1.3
CPNE8-201ENST00000331366 IGLV11-55A0A075B6I3 123 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 LOC105371242A0A075B767 164 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 SH2D7A6NKC9 451 aaPredicted RBP6.93□□□□□ -1.3
CPNE8-201ENST00000331366 NKX2-8O15522 239 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 GOSR1O95249 250 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 SRSF1Q07955 248 aaKnown RBP eCLIP6.93□□□□□ -1.3
CPNE8-201ENST00000331366 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 ATP1A1-AS1Q5TC04 95 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 OR10W1Q8NGF6 305 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 HIF1ANQ9NWT6 349 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 ZNF407Q9C0G0 2248 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 DSPP15924 2871 aaKnown RBP6.93□□□□□ -1.3
CPNE8-201ENST00000331366 GNG7O60262 68 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 RBMXL2O75526 392 aaKnown RBP6.93□□□□□ -1.3
CPNE8-201ENST00000331366 MYOD1P15172 320 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 PIP4P2Q8N4L2 257 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 CNEP1R1Q8N9A8 125 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 OR10AG1Q8NH19 301 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 CCL13Q99616 98 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 IGHV1-3A0A0C4DH29 117 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 B9A039 149 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 M0R1B8 84 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 TAX1BP3O14907 124 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 IGKV1-17P01599 117 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 CD33P20138 364 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 HOXA4Q00056 320 aaPredicted RBP6.93□□□□□ -1.3
CPNE8-201ENST00000331366 BVES-AS1Q5T3Y7 98 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 C12orf54Q6X4T0 127 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 Q6ZVH6 145 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 ERASQ7Z444 233 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 RNASE6Q93091 150 aaKnown RBP6.93□□□□□ -1.3
CPNE8-201ENST00000331366 ZNF747Q9BV97 191 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 HIGD1AQ9Y241 93 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 ABCA4P78363 2273 aa6.93□□□□□ -1.3
CPNE8-201ENST00000331366 TRAV5A0A0B4J249 113 aa6.92□□□□□ -1.3
CPNE8-201ENST00000331366 K7EMI3 77 aa6.92□□□□□ -1.3
CPNE8-201ENST00000331366 FAM87AP0C7U9 286 aa6.92□□□□□ -1.3
CPNE8-201ENST00000331366 RPL27AP46776 148 aaKnown RBP6.92□□□□□ -1.3
CPNE8-201ENST00000331366 KRTDAPP60985 99 aa6.92□□□□□ -1.3
CPNE8-201ENST00000331366 FAM208BQ5VWN6 2430 aa6.92□□□□□ -1.3
CPNE8-201ENST00000331366 APRG1Q8IVJ8 170 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms