RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 IFI27L1Q96BM0 104 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 C7orf69Q9H7B7 122 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 A0A1B0GWB2 263 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 OR4X2Q8NGF9 303 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 GEMIN7Q9H840 131 aaKnown RBP16.54■□□□□ 0.24
CMTM4-201ENST00000330687 SIGLEC8Q9NYZ4 499 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 C9orf172C9J069 976 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 C2orf83Q53S99 150 aa16.54■□□□□ 0.24
CMTM4-201ENST00000330687 SRSF8Q9BRL6 282 aaKnown RBP16.54■□□□□ 0.24
CMTM4-201ENST00000330687 BOD1L1Q8NFC6 3051 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 AGRNO00468 2067 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 PRB3Q04118 309 aaPredicted RBP16.53■□□□□ 0.24
CMTM4-201ENST00000330687 FAM90A1Q86YD7 464 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 OR9G4Q8NGQ1 327 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 OR1L8Q8NGR8 309 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 CCL13Q99616 98 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 CACNA1HO95180 2353 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 MEOX1P50221 254 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 RUSC1-AS1Q66K80 236 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 OR5AN1Q8NGI8 311 aa16.53■□□□□ 0.24
CMTM4-201ENST00000330687 SPAG8Q99932 426 aaPredicted RBP16.53■□□□□ 0.24
CMTM4-201ENST00000330687 TCRBV4S1A1TA0A5B7 111 aa16.52■□□□□ 0.24
CMTM4-201ENST00000330687 SMIM17P0DL12 118 aa16.52■□□□□ 0.24
CMTM4-201ENST00000330687 CT45A6P0DMU7 189 aa16.52■□□□□ 0.24
CMTM4-201ENST00000330687 CT45A5P0DMU8 189 aa16.52■□□□□ 0.24
CMTM4-201ENST00000330687 CT45A7P0DMV0 189 aa16.52■□□□□ 0.24
CMTM4-201ENST00000330687 MRPL20Q9BYC9 149 aaKnown RBP16.52■□□□□ 0.23
CMTM4-201ENST00000330687 IGKV2D-26A0A0A0MRZ7 120 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 WT1-ASQ06250 92 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 ZNF479Q96JC4 524 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 CKS2P33552 79 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 ABHD17AQ96GS6 310 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 CHAC1Q9BUX1 264 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 LPAL2Q16609 132 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 PIP4P2Q8N4L2 257 aa16.51■□□□□ 0.23
CMTM4-201ENST00000330687 SOX21Q9Y651 276 aaPredicted RBP16.51■□□□□ 0.23
CMTM4-201ENST00000330687 WISP2O76076 250 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 RPRMLQ8N4K4 120 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 FAM216BQ8N7L0 139 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 PRR7Q8TB68 274 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 SAP25Q8TEE9 199 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 FMC1Q96HJ9 113 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 TMEM160Q9NX00 188 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 GCSAMQ8N6F7 178 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 C20orf78Q9BR46 151 aa16.5■□□□□ 0.23
CMTM4-201ENST00000330687 CNOT1A5YKK6 2376 aaKnown RBP16.5■□□□□ 0.23
CMTM4-201ENST00000330687 NPIPB6E9PJ23 425 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 FAM222BQ8WU58 562 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 ZNF714Q96N38 554 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 PRSS22Q9GZN4 317 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 TGFAP01135 160 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 RBP4P02753 201 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 MLST8Q9BVC4 326 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 TTC28Q96AY4 2481 aa16.49■□□□□ 0.23
CMTM4-201ENST00000330687 M0R3E3 92 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 HBDP02042 147 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 CECR9P0C854 216 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 C17orf58Q2M2W7 97 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 Q86TA4 180 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 PTPRZ1P23471 2315 aaPredicted RBP16.48■□□□□ 0.23
CMTM4-201ENST00000330687 C19orf71A6NCJ1 209 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 EVI2AP22794 236 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 APOBEC3AP31941 199 aaPredicted RBP16.48■□□□□ 0.23
CMTM4-201ENST00000330687 C17orf77Q96MU5 243 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 MED13LQ71F56 2210 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 C19orf67A6NJJ6 358 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 SUB1P53999 127 aaKnown RBP eCLIP16.48■□□□□ 0.23
CMTM4-201ENST00000330687 S4R3C0 116 aa16.48■□□□□ 0.23
CMTM4-201ENST00000330687 CT45A10P0DMU9 189 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 TNFRSF1AP19438 455 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 RPUSD1Q9UJJ7 312 aaKnown RBP16.47■□□□□ 0.23
CMTM4-201ENST00000330687 A0A096LNJ9 63 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 DIAPH2-AS1Q14236 149 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 CACNG8Q8WXS5 425 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 HAX1O00165 279 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 LYZL1Q6UWQ5 148 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 TPSG1Q9NRR2 321 aa16.47■□□□□ 0.23
CMTM4-201ENST00000330687 TWIST1Q15672 202 aa16.46■□□□□ 0.23
CMTM4-201ENST00000330687 ZNF418Q8TF45 676 aaPredicted RBP16.46■□□□□ 0.23
CMTM4-201ENST00000330687 HIST1H4GQ99525 98 aa16.46■□□□□ 0.23
CMTM4-201ENST00000330687 FOXC2Q99958 501 aa16.46■□□□□ 0.23
CMTM4-201ENST00000330687 SPANXB1Q9NS25 103 aaPredicted RBP16.46■□□□□ 0.23
CMTM4-201ENST00000330687 SS18L2Q9UHA2 77 aa16.46■□□□□ 0.23
CMTM4-201ENST00000330687 MC5RP33032 325 aa16.46■□□□□ 0.23
CMTM4-201ENST00000330687 GAGE13Q4V321 117 aa16.46■□□□□ 0.23
CMTM4-201ENST00000330687 CXCL12P48061 93 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 OR10X1Q8NGY0 326 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 TRGV5A0A0B4J1U4 118 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 ORMDL3Q8N138 153 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 MRPS17Q9Y2R5 130 aaKnown RBP16.45■□□□□ 0.22
CMTM4-201ENST00000330687 IGKV1D-37A0A075B6S9 117 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 CCL3L1P16619 93 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 KIR2DL2P43627 348 aaPredicted RBP16.45■□□□□ 0.22
CMTM4-201ENST00000330687 ANXA2RQ3ZCQ2 193 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 ZC2HC1BQ5TFG8 222 aa16.45■□□□□ 0.22
CMTM4-201ENST00000330687 MBNL2Q5VZF2 373 aaKnown RBP16.45■□□□□ 0.22
CMTM4-201ENST00000330687 C6orf15Q6UXA7 325 aaPredicted RBP16.45■□□□□ 0.22
CMTM4-201ENST00000330687 SLC25A48Q6ZT89 311 aaKnown RBP16.45■□□□□ 0.22
CMTM4-201ENST00000330687 NDUFS7O75251 213 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 LGALS9BQ3B8N2 356 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms