RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TRAV8-1A0A0A6YYK1 113 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 I3L2K1 104 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 COX7A1P24310 79 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 CD24P25063 80 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 KLRB1Q12918 225 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 Q86TA4 180 aa12.2□□□□□ -0.46
BRCC3-201ENST00000330045 CFAP46Q8IYW2 2715 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 FAM231BA6NCW3 169 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 FAM90A27PA6NNH2 459 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 NPIPB6E9PJ23 425 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 RBP4P02753 201 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 COL8A1P27658 744 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 RBPJQ06330 500 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 PLGLAQ15195 96 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 EXOC3-AS1Q8N2X6 119 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 PPIAL4CA0A0B4J2A2 164 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 PPIAL4GP0DN37 164 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-201ENST00000330045 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 CLEC5AQ9NY25 188 aa12.19□□□□□ -0.46
BRCC3-201ENST00000330045 HRNRQ86YZ3 2850 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-201ENST00000330045 C20orf202A1L168 122 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 CD3EP07766 207 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 TSPOP30536 169 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 PRNTQ86SH4 94 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 STPG4Q8N801 248 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 VKORC1Q9BQB6 163 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 TMEM70Q9BUB7 260 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 ZFP30Q9Y2G7 519 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 ACACBO00763 2458 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.18□□□□□ -0.46
BRCC3-201ENST00000330045 M0QZ24 198 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 TOX4O94842 621 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 CHCHD1Q96BP2 118 aaKnown RBP12.18□□□□□ -0.46
BRCC3-201ENST00000330045 ABCA4P78363 2273 aa12.18□□□□□ -0.46
BRCC3-201ENST00000330045 ANKHD1Q8IWZ3 2542 aaKnown RBP12.17□□□□□ -0.46
BRCC3-201ENST00000330045 SH2D7A6NKC9 451 aaPredicted RBP12.17□□□□□ -0.46
BRCC3-201ENST00000330045 CHEK1O14757 476 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 IGKV1-17P01599 117 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 CYB5R2Q6BCY4 276 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 LINC01560Q8TB33 94 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 RNF5Q99942 180 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 ABCA1O95477 2261 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 CCL21O00585 134 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 IGLL1P15814 213 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 FAM120AOSQ5T036 256 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
BRCC3-201ENST00000330045 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
BRCC3-201ENST00000330045 SPTBN1Q01082 2364 aaKnown RBP12.17□□□□□ -0.46
BRCC3-201ENST00000330045 CNIH1O95406 144 aa12.16□□□□□ -0.46
BRCC3-201ENST00000330045 LINC00614P0C842 121 aa12.16□□□□□ -0.46
BRCC3-201ENST00000330045 HOXB4P17483 251 aaPredicted RBP12.16□□□□□ -0.46
BRCC3-201ENST00000330045 NDFIP1Q9BT67 221 aa12.16□□□□□ -0.46
BRCC3-201ENST00000330045 HIVEP3Q5T1R4 2406 aa12.16□□□□□ -0.46
BRCC3-201ENST00000330045 LOC102724200A0A096LPH7 203 aaPredicted RBP12.16□□□□□ -0.46
BRCC3-201ENST00000330045 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
BRCC3-201ENST00000330045 LY6LH3BQJ8 138 aa12.16□□□□□ -0.46
BRCC3-201ENST00000330045 HAX1O00165 279 aa12.16□□□□□ -0.46
BRCC3-201ENST00000330045 SRSF8Q9BRL6 282 aaKnown RBP12.16□□□□□ -0.46
BRCC3-201ENST00000330045 BPIFA4PQ86YQ2 179 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 TRBV19A0A075B6N1 114 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 TRBV6-1A0A0K0K1D8 114 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 K7EIM0 57 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 CRXO43186 299 aaPredicted RBP12.15□□□□□ -0.46
BRCC3-201ENST00000330045 ADORA2A-AS1P86434 159 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
BRCC3-201ENST00000330045 SHANK2-AS3Q9BTD1 123 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 PRORYQ9H606 182 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 RNF24Q9Y225 148 aa12.15□□□□□ -0.46
BRCC3-201ENST00000330045 TIMM23O14925 209 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 NDUFB8O95169 186 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 APOHP02749 345 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-201ENST00000330045 MUC15Q8N387 334 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 OR4F17Q8NGA8 305 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 C17orf77Q96MU5 243 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 ONECUT1Q9UBC0 465 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 IGSF10Q6WRI0 2623 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 TACC2O95359 2948 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 OR4C46A6NHA9 309 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 H3BRN7 92 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 HINT1P49773 126 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-201ENST00000330045 C1RLQ9NZP8 487 aa12.14□□□□□ -0.47
BRCC3-201ENST00000330045 ASH1LQ9NR48 2969 aaKnown RBP12.14□□□□□ -0.47
BRCC3-201ENST00000330045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.13□□□□□ -0.47
BRCC3-201ENST00000330045 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 LDLRAD2Q5SZI1 272 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 LINC00173Q6ZV60 143 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 ZNF785A8K8V0 405 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 SIAH2O43255 324 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 ZNF491Q8N8L2 437 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
BRCC3-201ENST00000330045 A0A1B0GUT8 65 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 K7EQM0 130 aa12.12□□□□□ -0.47
BRCC3-201ENST00000330045 OVOL3O00110 214 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms