RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 Q6ZN92 141 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 CIARTQ8N365 385 aaPredicted RBP11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 Q8N7P7 452 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 C5orf42Q9H799 3197 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 KCNS1Q96KK3 526 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 ZNF841Q6ZN19 808 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 NDUFA4L2Q9NRX3 87 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
SYNGR1-203ENST00000328933 CLPSL1A2RUU4 121 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 CD5LO43866 347 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 TMEM50AO95807 157 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 CRISP2P16562 243 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 CLRN3Q8NCR9 226 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 CHD9Q3L8U1 2897 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 RNF222A6NCQ9 220 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 TOMM20LQ6UXN7 152 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 TMEM14EPQ6UXP3 125 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 EXOC3-AS1Q8N2X6 119 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 NRN1Q9NPD7 142 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 PRUNE2Q8WUY3 3088 aa11.47□□□□□ -0.57
SYNGR1-203ENST00000328933 TMEM183BQ1AE95 376 aa11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 TMEM183AQ8IXX5 376 aa11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 XCL2Q9UBD3 114 aa11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 NMBP08949 121 aa11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 CFPP27918 469 aa11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 FAM3BP58499 235 aaPredicted RBP11.46□□□□□ -0.57
SYNGR1-203ENST00000328933 SCO2A0A1W2PP80 73 aa11.46□□□□□ -0.58
SYNGR1-203ENST00000328933 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.58
SYNGR1-203ENST00000328933 RNF212Q495C1 297 aa11.46□□□□□ -0.58
SYNGR1-203ENST00000328933 SIRPDQ9H106 197 aa11.46□□□□□ -0.58
SYNGR1-203ENST00000328933 KIAA1549Q9HCM3 1950 aa11.46□□□□□ -0.58
SYNGR1-203ENST00000328933 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
SYNGR1-203ENST00000328933 ASCL2Q99929 193 aa11.45□□□□□ -0.58
SYNGR1-203ENST00000328933 C19orf54Q5BKX5 351 aa11.45□□□□□ -0.58
SYNGR1-203ENST00000328933 PSG8Q9UQ74 426 aa11.45□□□□□ -0.58
SYNGR1-203ENST00000328933 H7C1H1 209 aa11.45□□□□□ -0.58
SYNGR1-203ENST00000328933 TOMM40O96008 361 aa11.45□□□□□ -0.58
SYNGR1-203ENST00000328933 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 DEFB130BP0DP73 79 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 DEFB130AP0DP74 79 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 BTF3P20290 206 aaKnown RBP11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 NCKAP5O14513 1909 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 AGMATQ9BSE5 352 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 EPDR1Q9UM22 224 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 APCSP02743 223 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 C8orf31Q8N9H6 132 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 KLK15Q9H2R5 256 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 SPATA31B1PQ5VZV4 182 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 MGST2Q99735 147 aa11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
SYNGR1-203ENST00000328933 NPIPB5A8MRT5 1133 aa11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 M0R3E3 92 aa11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 SRSF2Q01130 221 aaKnown RBP11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 TCEAL7Q9BRU2 100 aa11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 MDKP21741 143 aaPredicted RBP11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 TRBV20OR9-2A0A075B6H5 130 aa11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 C11orf71Q6IPW1 123 aa11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 ZNF705AQ6ZN79 300 aaPredicted RBP11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 KIR2DL4Q99706 377 aa11.43□□□□□ -0.58
SYNGR1-203ENST00000328933 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 MYOZ3Q8TDC0 251 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 A0A1W2PRE2 83 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 FBLL1A6NHQ2 334 aaKnown RBP11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 IGLV1-47P01700 117 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 NDUFA4O00483 81 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 G0S2P27469 103 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 FMC1Q96HJ9 113 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 MRPL27Q9P0M9 148 aaKnown RBP11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 MAST4O15021 2626 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 ZNF415Q09FC8 603 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 SMR3AQ99954 134 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
SYNGR1-203ENST00000328933 INSP01308 110 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 LGALS1P09382 135 aaKnown RBP11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 C1QL4Q86Z23 238 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 TRGV11A0A075B6L2 103 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 IGHV3-53P01767 116 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 FOLR2P14207 255 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 SLURP1P55000 103 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 Q8TAT8 98 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 IGKV1-39P01597 117 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 IGKV1D-39P04432 117 aa11.41□□□□□ -0.58
SYNGR1-203ENST00000328933 FOXE3Q13461 319 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms