RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PHLDA1Q8WV24 401 aaPredicted RBP10.18□□□□□ -0.78
CCDC60-201ENST00000327554 ZNF414Q96IQ9 312 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 ATP6V0BQ99437 205 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 VGLL1Q99990 258 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 U3KQK5 164 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 DMDP11532 3685 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 TRBV6-1A0A0K0K1D8 114 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 D6R8Y8 96 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 FOXI2Q6ZQN5 318 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 TRGV9Q99603 122 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 PATE3B3GLJ2 98 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 HBDP02042 147 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 EXOC3-AS1Q8N2X6 119 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 TMEM105Q8N8V8 129 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 SPRY4Q9C004 299 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
CCDC60-201ENST00000327554 AHCTF1Q8WYP5 2266 aa10.17□□□□□ -0.78
CCDC60-201ENST00000327554 URB1O60287 2271 aaKnown RBP10.17□□□□□ -0.78
CCDC60-201ENST00000327554 DSPP15924 2871 aaKnown RBP10.16□□□□□ -0.78
CCDC60-201ENST00000327554 K7ERJ3 54 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 GCSHP23434 173 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 DHRS13Q6UX07 377 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 BCL6BQ8N143 479 aaPredicted RBP10.16□□□□□ -0.78
CCDC60-201ENST00000327554 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 GAFA1Q96PS6 74 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 ASCL2Q99929 193 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 DKK2Q9UBU2 259 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 A0A1W2PPI3 338 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 PRSS47A8MTI9 375 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 ZNF207O43670 478 aaKnown RBP10.16□□□□□ -0.78
CCDC60-201ENST00000327554 CNEP1R1Q8N9A8 125 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
CCDC60-201ENST00000327554 WFDC12Q8WWY7 111 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 PRELID3AQ96N28 172 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
CCDC60-201ENST00000327554 SVILO95425 2214 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 CT45A10P0DMU9 189 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 CRIP1P50238 77 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 CCDC144NLQ6NUI1 221 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 OR10X1Q8NGY0 326 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 C8orf46Q8TAG6 207 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 PIFOQ8TCI5 191 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 IGKV2D-26A0A0A0MRZ7 120 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 NDUFS7O75251 213 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 IGLV2-23P01705 113 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 WFDC2Q14508 124 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 TMEM30BQ3MIR4 351 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 Q5PR19 223 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 TMEM108Q6UXF1 575 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 FAM216BQ8N7L0 139 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 PLSCR4Q9NRQ2 329 aa10.15□□□□□ -0.78
CCDC60-201ENST00000327554 WI2-2373I1.2A0A1W2PRP0 233 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 FBLL1A6NHQ2 334 aaKnown RBP10.14□□□□□ -0.79
CCDC60-201ENST00000327554 KIR2DL2P43627 348 aaPredicted RBP10.14□□□□□ -0.79
CCDC60-201ENST00000327554 PEAR1Q5VY43 1037 aaPredicted RBP10.14□□□□□ -0.79
CCDC60-201ENST00000327554 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 Q6AWC8 147 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 PVRIGQ6DKI7 326 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 ZNF788Q6ZQV5 615 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 CCL13Q99616 98 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 SERTM2A0A1B0GWG4 89 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 TMEM213A2RRL7 107 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 TM4SF5O14894 197 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 SPRY3O43610 288 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 MRGPRG-AS1Q2M3A8 158 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 DEFB108BQ8NET1 73 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 CHAC1Q9BUX1 264 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 TTTY13Q9BZ97 58 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 ZNF71Q9NQZ8 489 aaPredicted RBP10.14□□□□□ -0.79
CCDC60-201ENST00000327554 TPSG1Q9NRR2 321 aa10.14□□□□□ -0.79
CCDC60-201ENST00000327554 HCP5Q6MZN7 132 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 TMEM75Q8N9X5 138 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 OR4C13Q8NGP0 309 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 DKK4Q9UBT3 224 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 IGHV3-21A0A0B4J1V1 117 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 A0A1W2PRD5 423 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 A0A1W2PRF3 423 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 A0A1W2PRM7 423 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 C19orf67A6NJJ6 358 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 E9PLD3 99 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 RAB9AP51151 201 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 MRPL51Q4U2R6 128 aaKnown RBP10.13□□□□□ -0.79
CCDC60-201ENST00000327554 ZNF576Q9H609 170 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 HIGD1AQ9Y241 93 aa10.13□□□□□ -0.79
CCDC60-201ENST00000327554 PRRC2CQ9Y520 2896 aaKnown RBP10.13□□□□□ -0.79
CCDC60-201ENST00000327554 SPAARA0A1B0GVQ0 90 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 F8W1H4 67 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 PRB4P10163 310 aaPredicted RBP10.12□□□□□ -0.79
CCDC60-201ENST00000327554 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 TMEM164Q5U3C3 297 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 SPAG8Q99932 426 aaPredicted RBP10.12□□□□□ -0.79
CCDC60-201ENST00000327554 HHLA3Q9XRX5 114 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 CADP27708 2225 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 INTS1Q8N201 2190 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms