RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 H3BRM9 83 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 M0R2Z0 102 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 OVOL3O00110 214 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 IGLV2-23P01705 113 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 RBP4P02753 201 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 AREGP15514 252 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 AZU1P20160 251 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 GATA2P23769 480 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-201ENST00000317677 Q5PR19 223 aa10.44□□□□□ -0.74
CPNE1-201ENST00000317677 AKAP6Q13023 2319 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 SMIM27A0A1W2PRY6 76 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 OR4C46A6NHA9 309 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 APOA2P02652 100 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 COX7A1P24310 79 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 HSPE1P61604 102 aaKnown RBP10.43□□□□□ -0.74
CPNE1-201ENST00000317677 S100A7AQ86SG5 101 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 OSR1Q8TAX0 266 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-201ENST00000317677 HARBI1Q96MB7 349 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 IGHV3-72A0A0B4J1Y9 119 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 ISLRO14498 428 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 ANKRD17O75179 2603 aaKnown RBP10.43□□□□□ -0.74
CPNE1-201ENST00000317677 MPDU1O75352 247 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 LIPFP07098 398 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 EFNA4P52798 201 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 MRGPRG-AS1Q2M3A8 158 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 SSBP3Q9BWW4 388 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-201ENST00000317677 HEYLQ9NQ87 328 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-201ENST00000317677 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 ONECUT1Q9UBC0 465 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 WDR83OSQ9Y284 106 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 ARL2-SNX15V9GYD0 113 aa10.43□□□□□ -0.74
CPNE1-201ENST00000317677 BUB1B-PAK6H3BSN5 160 aa10.42□□□□□ -0.74
CPNE1-201ENST00000317677 ZFP36P26651 326 aaKnown RBP10.42□□□□□ -0.74
CPNE1-201ENST00000317677 GPR183P32249 361 aa10.42□□□□□ -0.74
CPNE1-201ENST00000317677 PDPNQ86YL7 162 aa10.42□□□□□ -0.74
CPNE1-201ENST00000317677 NPFFR1Q9GZQ6 430 aa10.42□□□□□ -0.74
CPNE1-201ENST00000317677 TEX50A0A1B0GTY4 177 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 IZUMO1RA6ND01 250 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 E7EUB6 86 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 LY6LH3BQJ8 138 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 MC5RP33032 325 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 MTURNQ8N3F0 131 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 FLYWCH2Q96CP2 140 aaKnown RBP10.41□□□□□ -0.74
CPNE1-201ENST00000317677 TPSG1Q9NRR2 321 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 TNFRSF19Q9NS68 423 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 PRNDQ9UKY0 176 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 CGB1A6NKQ9 187 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 OR2J3O76001 311 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 OPRK1P41145 380 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 PRCDQ00LT1 54 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 KLRD1Q13241 179 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 TCTEX1D4Q5JR98 221 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 SPATA12Q7Z6I5 190 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 OR4C13Q8NGP0 309 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 MBD6Q96DN6 1003 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 C1orf159Q96HA4 380 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 ZNF257Q9Y2Q1 563 aa10.41□□□□□ -0.74
CPNE1-201ENST00000317677 POLQO75417 2590 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 IGHV1-3A0A0C4DH29 117 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 PSMB11A5LHX3 300 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 SYS1-DBNDD2H3BUS1 97 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 IGHV4-39P01824 125 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 CNTFRP26992 372 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 HSD52Q0P140 79 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 RAB31Q13636 194 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 OR2K2Q8NGT1 345 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 TMEM167AQ8TBQ9 72 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
CPNE1-201ENST00000317677 CCDC168Q8NDH2 2452 aa10.4□□□□□ -0.75
CPNE1-201ENST00000317677 PLP1P60201 277 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 CD300EQ496F6 205 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-201ENST00000317677 TMEM97Q5BJF2 176 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 C10orf55Q5SWW7 151 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 HINT2Q9BX68 163 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 ZNF331Q9NQX6 463 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-201ENST00000317677 TECRQ9NZ01 308 aaKnown RBP10.39□□□□□ -0.75
CPNE1-201ENST00000317677 YTHDF2Q9Y5A9 579 aaKnown RBP10.39□□□□□ -0.75
CPNE1-201ENST00000317677 PLXNB1O43157 2135 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 A6NDN8 102 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 GOSR1O95249 250 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 RAB9AP51151 201 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 FAM120AOSQ5T036 256 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 OR11H6Q8NGC7 330 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 BPESC1Q9GZL8 116 aa10.39□□□□□ -0.75
CPNE1-201ENST00000317677 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-201ENST00000317677 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 ODF3BA8MYP8 253 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 M0R1W7 72 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 SLC25A17O43808 307 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 CRYGBP07316 175 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 OR5AL1P0C617 328 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms