RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 METTL15P1P0C7V9 234 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 PLP1P60201 277 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 RRAS2P62070 204 aaPredicted RBP12.77□□□□□ -0.37
TPM1-203ENST00000317516 ZNF846Q147U1 533 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 TMEM14EPQ6UXP3 125 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 ZNF709Q8N972 641 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 ZBTB8BQ8NAP8 495 aaPredicted RBP12.77□□□□□ -0.37
TPM1-203ENST00000317516 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 CELA1Q9UNI1 258 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 HYDINQ4G0P3 5121 aa12.77□□□□□ -0.37
TPM1-203ENST00000317516 IGHV4-4A0A075B6R2 117 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 TEX48A0A1B0GUV7 120 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 LYRM1O43325 122 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 DUSP14O95147 198 aaKnown RBP12.76□□□□□ -0.37
TPM1-203ENST00000317516 LINC00869P0C866 280 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 EMP1P54849 157 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 FGL1Q08830 312 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 TEPPQ6URK8 271 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 SLC35B3Q9H1N7 401 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 C20orf85Q9H1P6 137 aa12.76□□□□□ -0.37
TPM1-203ENST00000317516 H3BRN7 92 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 PLA2G10O15496 165 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 HBE1P02100 147 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 AMBPP02760 352 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 PXDC1Q5TGL8 231 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 GSG1LQ6UXU4 331 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 ZNF767PQ75MW2 155 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 C20orf173Q96LM9 149 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 GGACTQ9BVM4 153 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 SCRT1Q9BWW7 348 aa12.75□□□□□ -0.37
TPM1-203ENST00000317516 EPPK1P58107 5090 aaKnown RBP12.74□□□□□ -0.37
TPM1-203ENST00000317516 K7EPK0 472 aa12.74□□□□□ -0.37
TPM1-203ENST00000317516 L7N2F9 121 aa12.74□□□□□ -0.37
TPM1-203ENST00000317516 GOSR2O14653 212 aa12.74□□□□□ -0.37
TPM1-203ENST00000317516 TCRBP04435 133 aa12.74□□□□□ -0.37
TPM1-203ENST00000317516 VAMP2P63027 116 aa12.74□□□□□ -0.37
TPM1-203ENST00000317516 LRRC20Q8TCA0 184 aa12.74□□□□□ -0.37
TPM1-203ENST00000317516 TMEM208Q9BTX3 173 aa12.74□□□□□ -0.37
TPM1-203ENST00000317516 CCNKO75909 580 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 MBPP02686 304 aaPredicted RBP12.73□□□□□ -0.37
TPM1-203ENST00000317516 PRR20EP86478 221 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 PRR20CP86479 221 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 PRR20DP86480 221 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 PRR20BP86481 221 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 PRR20AP86496 221 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 ZNF546Q86UE3 836 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 IGF2BP2-AS1Q96M15 143 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 C17orf77Q96MU5 243 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 NDUFAF3Q9BU61 184 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 ARL6Q9H0F7 186 aa12.73□□□□□ -0.37
TPM1-203ENST00000317516 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
TPM1-203ENST00000317516 A8MTW9 85 aa12.72□□□□□ -0.37
TPM1-203ENST00000317516 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
TPM1-203ENST00000317516 C1orf158Q8N1D5 194 aa12.72□□□□□ -0.37
TPM1-203ENST00000317516 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
TPM1-203ENST00000317516 ARV1Q9H2C2 271 aa12.72□□□□□ -0.37
TPM1-203ENST00000317516 RCL1Q9Y2P8 373 aaKnown RBP12.72□□□□□ -0.37
TPM1-203ENST00000317516 TRAV6A0A075B6T7 132 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 TRAV8-2A0A0B4J237 113 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 LOC102723971A0A1B0GUV8 181 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 C5orf51A6NDU8 294 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 FAM25EA8MYX2 175 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 B2MP61769 119 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 SLC38A11Q08AI6 406 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 RAB31Q13636 194 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 ZNF431Q8TF32 576 aaPredicted RBP12.71□□□□□ -0.37
TPM1-203ENST00000317516 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 UHRF2Q96PU4 802 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 NIPSNAP3BQ9BS92 247 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 CCDC32Q9BV29 185 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 DKK2Q9UBU2 259 aa12.71□□□□□ -0.37
TPM1-203ENST00000317516 A0A087X0K7 114 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 AGPAT2O15120 278 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 P0DMU3 169 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 FAM231AP0DMU4 169 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 FAM231CP0DMU5 169 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 PVALBP20472 110 aaPredicted RBP12.7□□□□□ -0.38
TPM1-203ENST00000317516 BCAP31P51572 246 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 FAM222AQ5U5X8 452 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 C12orf45Q8N5I9 185 aaPredicted RBP12.7□□□□□ -0.38
TPM1-203ENST00000317516 RNF182Q8N6D2 247 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 NUDT15Q9NV35 164 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 PPP1R14DQ9NXH3 145 aa12.7□□□□□ -0.38
TPM1-203ENST00000317516 LSM5Q9Y4Y9 91 aaKnown RBP12.7□□□□□ -0.38
TPM1-203ENST00000317516 CCSO14618 274 aa12.69□□□□□ -0.38
TPM1-203ENST00000317516 INSP01308 110 aa12.69□□□□□ -0.38
TPM1-203ENST00000317516 OXA1LQ15070 435 aa12.69□□□□□ -0.38
TPM1-203ENST00000317516 PATE2Q6UY27 113 aa12.69□□□□□ -0.38
TPM1-203ENST00000317516 LINC00299Q6ZSB3 139 aa12.69□□□□□ -0.38
TPM1-203ENST00000317516 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
TPM1-203ENST00000317516 C2orf50Q96LR7 162 aa12.69□□□□□ -0.38
TPM1-203ENST00000317516 YTHDF2Q9Y5A9 579 aaKnown RBP12.69□□□□□ -0.38
TPM1-203ENST00000317516 BIRC6Q9NR09 4857 aa12.68□□□□□ -0.38
TPM1-203ENST00000317516 FAM240BA0A1B0GVZ2 78 aa12.68□□□□□ -0.38
TPM1-203ENST00000317516 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
TPM1-203ENST00000317516 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms