RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 PSG1P11464 419 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 SLC35B1P78383 322 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 PAX8Q06710 450 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 MAPK1IP1LQ8NDC0 245 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 C14orf144Q96I85 54 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 GPR82Q96P67 336 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 TBX15Q96SF7 602 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 HILPDAQ9Y5L2 63 aa11.2□□□□□ -0.62
VRK3-201ENST00000316763 BRS3P32247 399 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 LOXL1Q08397 574 aaPredicted RBP11.19□□□□□ -0.62
VRK3-201ENST00000316763 NPBQ8NG41 125 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 WIPF2Q8TF74 440 aaPredicted RBP11.19□□□□□ -0.62
VRK3-201ENST00000316763 Q9H3A6 140 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 GSX1Q9H4S2 264 aaPredicted RBP11.19□□□□□ -0.62
VRK3-201ENST00000316763 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 ABCA2Q9BZC7 2435 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 A8MWP6 167 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 APCSP02743 223 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 SNRPCP09234 159 aaKnown RBP11.19□□□□□ -0.62
VRK3-201ENST00000316763 PRR27Q6MZM9 219 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 ZNF600Q6ZNG1 722 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 TMEM68Q96MH6 324 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 RBM14Q96PK6 669 aaKnown RBP11.19□□□□□ -0.62
VRK3-201ENST00000316763 SLC25A39Q9BZJ4 359 aaPredicted RBP11.19□□□□□ -0.62
VRK3-201ENST00000316763 GNB4Q9HAV0 340 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 LPAR2Q9HBW0 351 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 OTORQ9NRC9 128 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 ITPR3Q14573 2671 aa11.19□□□□□ -0.62
VRK3-201ENST00000316763 NDUFA3O95167 84 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 TOMM40O96008 361 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 CCDC144NLQ6NUI1 221 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
VRK3-201ENST00000316763 SIGLECL1Q8N7X8 197 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 CFHR4Q92496 578 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 AKAP9Q99996 3911 aa11.18□□□□□ -0.62
VRK3-201ENST00000316763 ZNF705FA8MVS1 300 aaPredicted RBP11.17□□□□□ -0.62
VRK3-201ENST00000316763 CA1P00915 261 aaPredicted RBP11.17□□□□□ -0.62
VRK3-201ENST00000316763 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
VRK3-201ENST00000316763 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
VRK3-201ENST00000316763 UBE2E1P51965 193 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 LINC00310P59036 64 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 HES1Q14469 280 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 MINOS1Q5TGZ0 78 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 LEMD1Q68G75 181 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 LHFPL4Q7Z7J7 247 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 MINOS1-NBL1R4GNA1 71 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 OOSP1A8MZH6 123 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 ZNF253O75346 499 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 TCRAP04437 139 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 MSMBP08118 114 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 KIAA1644Q3SXP7 199 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 HSPB9Q9BQS6 159 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 C7orf69Q9H7B7 122 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 MRPL27Q9P0M9 148 aaKnown RBP11.17□□□□□ -0.62
VRK3-201ENST00000316763 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
VRK3-201ENST00000316763 TRAV30A0A087WSZ9 112 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 K7EIM0 57 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 BMPR1BO00238 502 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 LTAP01374 205 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 SRIP30626 198 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 C5orf64Q2M2E5 130 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
VRK3-201ENST00000316763 NDUFAF3Q9BU61 184 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 MLST8Q9BVC4 326 aa11.16□□□□□ -0.62
VRK3-201ENST00000316763 WNK2Q9Y3S1 2297 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 A8MWL6 223 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 B4DSR2 109 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 CT83Q5H943 113 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 Q6ZWC4 215 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 BPIFA4PQ86YQ2 179 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 KCNS1Q96KK3 526 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 RPP21Q9H633 154 aaKnown RBP11.15□□□□□ -0.62
VRK3-201ENST00000316763 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 TBL2Q9Y4P3 447 aaKnown RBP11.15□□□□□ -0.62
VRK3-201ENST00000316763 ZNF469Q96JG9 3925 aaPredicted RBP11.15□□□□□ -0.62
VRK3-201ENST00000316763 F2Z2F3 143 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 SMAD7O15105 426 aaKnown RBP11.15□□□□□ -0.62
VRK3-201ENST00000316763 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
VRK3-201ENST00000316763 OR4F17Q8NGA8 305 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 NEU1Q99519 415 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
VRK3-201ENST00000316763 A0A1W2PRD5 423 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 A0A1W2PRF3 423 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 A0A1W2PRM7 423 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 NPIPB5A8MRT5 1133 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 H3BTX0 84 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 P01737 135 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 GPX1P07203 203 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms