RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
RFFL-201ENST00000315249 XCL2Q9UBD3 114 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 A0A087X0M5 115 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 A0A1B0GX30 115 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 COTL1Q14019 142 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 FOXL2NBQ6ZUU3 175 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 IMMP2LQ96T52 175 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 FOXC2Q99958 501 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 RNF126Q9BV68 326 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 TREML4Q6UXN2 200 aa10.94□□□□□ -0.66
RFFL-201ENST00000315249 DNAL4O96015 105 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 GZMBP10144 247 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 NTF4P34130 210 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 IGHV4-30-2A0A087WSY4 118 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 TRGV9Q99603 122 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 SHISA9B4DS77 424 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 MLANAQ16655 118 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 TMEM249Q2WGJ8 235 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 ZNF506Q5JVG8 444 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 Q6AWC8 147 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 COL4A4P53420 1690 aaPredicted RBP10.93□□□□□ -0.66
RFFL-201ENST00000315249 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 CDX1P47902 265 aaPredicted RBP10.93□□□□□ -0.66
RFFL-201ENST00000315249 IGLV3-9A0A075B6K5 115 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 MPZP25189 248 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 IGF2-ASQ6U949 168 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 ZNF562Q6V9R5 426 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 OBSL1O75147 1896 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 CXorf65A6NEN9 183 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 ATP5LO75964 103 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
RFFL-201ENST00000315249 Q8TAT8 98 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 KLF2Q9Y5W3 355 aaPredicted RBP10.92□□□□□ -0.66
RFFL-201ENST00000315249 F5H768 121 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 ID3Q02535 119 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 DEFB112Q30KQ8 113 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 IGLV1-44P01699 117 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 JOSD1Q15040 202 aaPredicted RBP10.92□□□□□ -0.66
RFFL-201ENST00000315249 MGST2Q99735 147 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 Q8TCH9 128 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 ZNF524Q96C55 264 aa10.92□□□□□ -0.66
RFFL-201ENST00000315249 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
RFFL-201ENST00000315249 IGKV1-5P01602 117 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 IGHV4-59P01825 116 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 ZNF138P52744 262 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 ADORA2A-AS1P86434 159 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 SPATA31B1PQ5VZV4 182 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.91□□□□□ -0.66
RFFL-201ENST00000315249 CA1P00915 261 aaPredicted RBP10.91□□□□□ -0.66
RFFL-201ENST00000315249 CD28P10747 220 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 FAM120AOSQ5T036 256 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.91□□□□□ -0.66
RFFL-201ENST00000315249 IGHV2-5P01817 119 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 HOXA5P20719 270 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 LOXP28300 417 aaPredicted RBP10.91□□□□□ -0.66
RFFL-201ENST00000315249 OR11H2Q8NH07 326 aa10.91□□□□□ -0.66
RFFL-201ENST00000315249 C9orf139Q6ZV77 190 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 KIAA1549LQ6ZVL6 1849 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 A0A1W2PPI3 338 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 CCL20P78556 96 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 PCNX3Q9H6A9 2034 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 DAD1P61803 113 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 PGPEP1LA6NFU8 196 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 TOMM40O96008 361 aa10.9□□□□□ -0.66
RFFL-201ENST00000315249 IGHV4-61A0A0C4DH41 118 aa10.9□□□□□ -0.67
RFFL-201ENST00000315249 RPL36AP83881 106 aaKnown RBP10.9□□□□□ -0.67
RFFL-201ENST00000315249 RPL36ALQ969Q0 106 aaKnown RBP10.9□□□□□ -0.67
RFFL-201ENST00000315249 WDR83OSQ9Y284 106 aa10.9□□□□□ -0.67
RFFL-201ENST00000315249 PMCHL1Q16048 86 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 WDR86Q86TI4 376 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 LINC00477Q96M19 166 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 MCRIP2Q9BUT9 160 aaKnown RBP10.89□□□□□ -0.67
RFFL-201ENST00000315249 ZNF106Q9H2Y7 1883 aaKnown RBP10.89□□□□□ -0.67
RFFL-201ENST00000315249 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 IZUMO1RA6ND01 250 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 RNF222A6NCQ9 220 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 PRR14LQ5THK1 2151 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 A0A1W2PNU3 283 aaPredicted RBP10.89□□□□□ -0.67
RFFL-201ENST00000315249 TANC2Q9HCD6 1990 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 SRP19P09132 144 aaKnown RBP10.89□□□□□ -0.67
RFFL-201ENST00000315249 APOC4P55056 127 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 IGFL2Q6UWQ7 119 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 CKS1BP61024 79 aa10.89□□□□□ -0.67
RFFL-201ENST00000315249 IGHV3-64A0A075B6Q5 118 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 TRBV6-6A0A0A6YYG2 114 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 F2Z2F3 143 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 NDUFB8O95169 186 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 STAG3L2P0CL84 134 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 MST1LQ2TV78 715 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 SCGB1A1P11684 91 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 ERCC8Q13216 396 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 LDLRAD4O15165 306 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 BTCP35070 178 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 C17orf58Q2M2W7 97 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms