RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
C2CD3-201ENST00000313663 GAS1P54826 345 aa7.34□□□□□ -1.23
C2CD3-201ENST00000313663 NHLRC3Q5JS37 347 aa7.34□□□□□ -1.23
C2CD3-201ENST00000313663 COQ2Q96H96 371 aa7.34□□□□□ -1.23
C2CD3-201ENST00000313663 CCL1P22362 96 aa7.34□□□□□ -1.23
C2CD3-201ENST00000313663 ZNF329Q86UD4 541 aa7.34□□□□□ -1.23
C2CD3-201ENST00000313663 C14orf144Q96I85 54 aa7.34□□□□□ -1.23
C2CD3-201ENST00000313663 M0R1W7 72 aa7.34□□□□□ -1.24
C2CD3-201ENST00000313663 PSPNO60542 156 aa7.34□□□□□ -1.24
C2CD3-201ENST00000313663 TPTE2P1Q5T6R2 138 aa7.34□□□□□ -1.24
C2CD3-201ENST00000313663 FAM89BQ8N5H3 189 aa7.34□□□□□ -1.24
C2CD3-201ENST00000313663 C11orf68Q9H3H3 251 aaKnown RBP7.34□□□□□ -1.24
C2CD3-201ENST00000313663 RFNGQ9Y644 331 aa7.34□□□□□ -1.24
C2CD3-201ENST00000313663 TNFSF13O75888 250 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 CDK2AP2O75956 126 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 IGFBP3P17936 291 aaPredicted RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 GNG5P63218 68 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 C18orf12Q96KH6 178 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 NAA38Q9BRA0 125 aaKnown RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 GATA3P23771 443 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 PAX2Q02962 417 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 LYZL4Q96KX0 146 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 MBD3L4A6NDZ8 208 aaPredicted RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 MBD3L3A6NE82 208 aaPredicted RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 MBD3L5A6NJ08 208 aaPredicted RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 SRSF4Q08170 494 aaKnown RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 LINC01356Q8N9X3 169 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 MBD3L2Q8NHZ7 208 aaPredicted RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 MESP1Q9BRJ9 268 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 BPESC1Q9GZL8 116 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 A0A0C4DFX4 3053 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 J3QKU1 62 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 PAX4O43316 350 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 NAPSAO96009 420 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 RPL35AP18077 110 aaKnown RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 MST1P26927 711 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 ZNF362Q5T0B9 420 aaPredicted RBP7.33□□□□□ -1.24
C2CD3-201ENST00000313663 HEATR5AQ86XA9 2040 aa7.33□□□□□ -1.24
C2CD3-201ENST00000313663 IGHV1-3A0A0C4DH29 117 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 PMS2P5A8MQ11 134 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 DPM2O94777 84 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 C6orf226Q5I0X4 101 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 MBNL3Q9NUK0 354 aaKnown RBP7.32□□□□□ -1.24
C2CD3-201ENST00000313663 F8WEM9 126 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 PSG1P11464 419 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 CRYGSP22914 178 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 FAM19A2Q8N3H0 131 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 PRB2P02812 416 aaPredicted RBP7.32□□□□□ -1.24
C2CD3-201ENST00000313663 TFF1P04155 84 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 ZNF138P52744 262 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 OR2K2Q8NGT1 345 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 WFDC12Q8WWY7 111 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 RNASE7Q9H1E1 156 aaKnown RBP7.32□□□□□ -1.24
C2CD3-201ENST00000313663 NRN1Q9NPD7 142 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 SRSF6Q13247 344 aaKnown RBP7.32□□□□□ -1.24
C2CD3-201ENST00000313663 FHL1Q13642 323 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 EFNB3Q15768 340 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 SP5Q6BEB4 398 aaPredicted RBP7.32□□□□□ -1.24
C2CD3-201ENST00000313663 C1orf159Q96HA4 380 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 PRTN3P24158 256 aa7.32□□□□□ -1.24
C2CD3-201ENST00000313663 ZNF48Q96MX3 618 aaPredicted RBP7.32□□□□□ -1.24
C2CD3-201ENST00000313663 INSP01308 110 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 ACTL10Q5JWF8 245 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 BMPERQ8N8U9 685 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 C5orf30Q96GV9 206 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 ZNF319Q9P2F9 582 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 TP53BP1Q12888 1972 aaPredicted RBP7.31□□□□□ -1.24
C2CD3-201ENST00000313663 MLNRO43193 412 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 RAMP3O60896 148 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 RPL23P62829 140 aaKnown RBP7.31□□□□□ -1.24
C2CD3-201ENST00000313663 OR10W1Q8NGF6 305 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 LINC01559Q495D7 138 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 KLF17Q5JT82 389 aaPredicted RBP7.31□□□□□ -1.24
C2CD3-201ENST00000313663 LINC00477Q96M19 166 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 MS4A6AQ9H2W1 248 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 TLN1Q9Y490 2541 aaKnown RBP7.31□□□□□ -1.24
C2CD3-201ENST00000313663 A0A0G2JNJ9 132 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 CD55P08174 381 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 KLRD1Q13241 179 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 IFI27L1Q96BM0 104 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 Q9UFV3 132 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 TRBV7-1A0A0A6YYK4 115 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 TRAV2A0A0B4J234 112 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 RNF223E7ERA6 249 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 FCN3O75636 299 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 IGHV4-39P01824 125 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 TMEM155Q4W5P6 130 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 SLC25A48Q6ZT89 311 aaKnown RBP7.31□□□□□ -1.24
C2CD3-201ENST00000313663 GGNQ86UU5 652 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 FGFBP3Q8TAT2 258 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 UBE2E2Q96LR5 201 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 SRSF8Q9BRL6 282 aaKnown RBP7.31□□□□□ -1.24
C2CD3-201ENST00000313663 RHPN1-AS1Q9BWJ2 59 aa7.31□□□□□ -1.24
C2CD3-201ENST00000313663 KLHDC3Q9BQ90 382 aa7.3□□□□□ -1.24
C2CD3-201ENST00000313663 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms