RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 TMEM61Q8N0U2 210 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 SELENOKQ9Y6D0 94 aa9.52□□□□□ -0.89
CHMP2A-201ENST00000312547 HELTA6NFD8 242 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 G3V4G9 280 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 TSPAN4O14817 238 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 MRPS12O15235 138 aaKnown RBP9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 MBP02144 154 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 SPATA31B1PQ5VZV4 182 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 OR8I2Q8N0Y5 310 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 RPP25LQ8N5L8 163 aaKnown RBP9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 FAM167A-AS1Q96KT0 104 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 MRPL32Q9BYC8 188 aaKnown RBP9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 RPRMQ9NS64 109 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 RNF24Q9Y225 148 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 FUT9Q9Y231 359 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
CHMP2A-201ENST00000312547 TRAV5A0A0B4J249 113 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 ZNF785A8K8V0 405 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 RPL7P18124 248 aaKnown RBP9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 RHOBP62745 196 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 TMEM41BQ5BJD5 291 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 KPRPQ5T749 579 aaPredicted RBP9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 SIGLEC15Q6ZMC9 328 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 MIR17HGQ75NE6 70 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 OR10G4Q8NGN3 311 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 OR10G9Q8NGN4 311 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 OR10G7Q8NGN6 311 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 GPR82Q96P67 336 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 SLC25A22Q9H936 323 aa9.5□□□□□ -0.89
CHMP2A-201ENST00000312547 TRAV2A0A0B4J234 112 aa9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 RBPMS2Q6ZRY4 209 aaKnown RBP9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 TMED6Q8WW62 240 aa9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 SPAG8Q99932 426 aaPredicted RBP9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 SLC25A2Q9BXI2 301 aa9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 TMEM14CQ9P0S9 112 aa9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 ZNF256Q9Y2P7 627 aaPredicted RBP9.49□□□□□ -0.89
CHMP2A-201ENST00000312547 A0A087X0K7 114 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 UMAD1C9J7I0 102 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 GP9P14770 177 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 GALR1P47211 349 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 AKR1C8PQ5T2L2 129 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 EIF5AL1Q6IS14 154 aaKnown RBP9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 FAM122CQ6P4D5 195 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 BPIFA4PQ86YQ2 179 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 DCANP1Q8TF63 244 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
CHMP2A-201ENST00000312547 EIF3GO75821 320 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 IGLC2P0DOY2 106 aa9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 CDC34P49427 236 aaPredicted RBP9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 ZNF726P1Q15940 193 aa9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 SSX7Q7RTT5 188 aa9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 RAB24Q969Q5 203 aa9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 PHYHIPLQ96FC7 376 aa9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 ZMAT5Q9UDW3 170 aaKnown RBP9.47□□□□□ -0.89
CHMP2A-201ENST00000312547 IGKV3-7A0A075B6H7 116 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 A0A1W2PPV4 95 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 H3BQ15 152 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 K7EQG2 157 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 SOCS3O14543 225 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 STAG3L2P0CL84 134 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 STAG3L3P0CL85 134 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 FHITP49789 147 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 TAS2R45P59539 299 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 PAFAH1B2P68402 229 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 GUCA2BQ16661 112 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 DPPA3Q6W0C5 159 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 GBGT1Q8N5D6 347 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 HRH4Q9H3N8 390 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.9
CHMP2A-201ENST00000312547 CTXND1A0A1B0GTU2 59 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 OR4C46A6NHA9 309 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 PYYP10082 97 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 ATF4P18848 351 aaPredicted RBP9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 MEOX2P50222 304 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 SULT1A2P50226 295 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 RAB5CP51148 216 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 KHDC3LQ587J8 217 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 PAXXQ9BUH6 204 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
CHMP2A-201ENST00000312547 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 DNASE2O00115 360 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 HMGB3O15347 200 aaKnown RBP9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 TFPI2P48307 235 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 GUK1Q16774 197 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 PQLC2Q6ZP29 291 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms