RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PRR20DP86480 221 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 PRR20BP86481 221 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 PRR20AP86496 221 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 ZFAND6Q6FIF0 208 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 LINC00305Q7Z4B0 112 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 WWC2-AS2Q96NR7 200 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 SHANK2-AS3Q9BTD1 123 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 MRPS12O15235 138 aaKnown RBP8.81□□□□□ -1
SCFD1-201ENST00000311943 OPCMLQ14982 345 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 MED28Q9H204 178 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 HIGD1AQ9Y241 93 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 G3V3Q6 166 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 FABP1P07148 127 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 S100A11P31949 105 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 BMI1P35226 326 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 PLP1P60201 277 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 TRPT1Q86TN4 253 aaKnown RBP8.81□□□□□ -1
SCFD1-201ENST00000311943 STX12Q86Y82 276 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 RYR3Q15413 4870 aa8.81□□□□□ -1
SCFD1-201ENST00000311943 FNDC10F2Z333 226 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 H3BQ15 152 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 SLC17A3O00476 420 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 CA1P00915 261 aaPredicted RBP8.8□□□□□ -1
SCFD1-201ENST00000311943 RLN2P04090 185 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 RAP2BP61225 183 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 GGACTQ9BVM4 153 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 NPCDR1Q9BY65 106 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 PXMP4Q9Y6I8 212 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 LYL1P12980 280 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 RPL12P30050 165 aaKnown RBP8.8□□□□□ -1
SCFD1-201ENST00000311943 AP2S1P53680 142 aaPredicted RBP8.8□□□□□ -1
SCFD1-201ENST00000311943 B2MP61769 119 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 CSTL1Q9H114 145 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 SLC39A9Q9NUM3 307 aa8.8□□□□□ -1
SCFD1-201ENST00000311943 TRAV2A0A0B4J234 112 aa8.79□□□□□ -1
SCFD1-201ENST00000311943 PRM2P04554 102 aa8.79□□□□□ -1
SCFD1-201ENST00000311943 CYCSP99999 105 aaKnown RBP8.79□□□□□ -1
SCFD1-201ENST00000311943 C1orf194Q5T5A4 169 aa8.79□□□□□ -1
SCFD1-201ENST00000311943 ZNF546Q86UE3 836 aa8.79□□□□□ -1
SCFD1-201ENST00000311943 STHQ8IWL8 128 aa8.79□□□□□ -1
SCFD1-201ENST00000311943 SLC35B3Q9H1N7 401 aa8.79□□□□□ -1
SCFD1-201ENST00000311943 SEPSECSQ9HD40 501 aaKnown RBP8.79□□□□□ -1
SCFD1-201ENST00000311943 A0A0J9YWU9 116 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 ZNF705FA8MVS1 300 aaPredicted RBP8.78□□□□□ -1
SCFD1-201ENST00000311943 H3BMM0 161 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 COX7A2P2O60397 106 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 CD5P06127 495 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 PYYP10082 97 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 SELENOTP62341 195 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 HBG1P69891 147 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 HBG2P69892 147 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 C16orf92Q96LL3 132 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 WDR61Q9GZS3 305 aaKnown RBP8.78□□□□□ -1
SCFD1-201ENST00000311943 XCL2Q9UBD3 114 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 HSPB11Q9Y547 144 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 SPRY2O43597 315 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 OR4B1Q8NGF8 309 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 RNF183Q96D59 192 aa8.78□□□□□ -1
SCFD1-201ENST00000311943 PARD6GQ9BYG4 376 aaPredicted RBP8.78□□□□□ -1
SCFD1-201ENST00000311943 TENM2Q9NT68 2774 aa8.77□□□□□ -1.01
SCFD1-201ENST00000311943 PRAC2D3DTV9 90 aa8.77□□□□□ -1.01
SCFD1-201ENST00000311943 RPL29P47914 159 aaKnown RBP8.77□□□□□ -1.01
SCFD1-201ENST00000311943 APOC4P55056 127 aa8.77□□□□□ -1.01
SCFD1-201ENST00000311943 FAM78BQ5VT40 261 aa8.77□□□□□ -1.01
SCFD1-201ENST00000311943 SLC25A31Q9H0C2 315 aa8.77□□□□□ -1.01
SCFD1-201ENST00000311943 DNAJC4Q9NNZ3 241 aa8.77□□□□□ -1.01
SCFD1-201ENST00000311943 CFDP00746 253 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-201ENST00000311943 SNRPD3P62318 126 aaKnown RBP8.76□□□□□ -1.01
SCFD1-201ENST00000311943 ZNF586Q9NXT0 402 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 FBXL17Q9UF56 701 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 PLECQ15149 4684 aaKnown RBP8.76□□□□□ -1.01
SCFD1-201ENST00000311943 GALR1P47211 349 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 KIR3DS1Q14943 382 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 Q6ZRG5 221 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 Q6ZWC4 215 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 ZNF709Q8N972 641 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 MUC7Q8TAX7 377 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 ATP5SQ99766 215 aa8.76□□□□□ -1.01
SCFD1-201ENST00000311943 KIR2DL5BA0A0G2JN68 375 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 KIR2DL5BA0A0G2JPC4 375 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 RNF222A6NCQ9 220 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 IGLC2P0DOY2 106 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 ATP6V1FQ16864 119 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 KIR2DL5AQ8N109 375 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 OR2T35Q8NGX2 323 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 OR11H2Q8NH07 326 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 KIR2DL5BQ8NHK3 375 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 SLC25A2Q9BXI2 301 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 SAV1Q9H4B6 383 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-201ENST00000311943 FXYD6-FXYD2A0A087WZ82 144 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 ISLRO14498 428 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 HMGB3O15347 200 aaKnown RBP8.75□□□□□ -1.01
SCFD1-201ENST00000311943 OR10J4P0C629 311 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 HLA-DRB4P13762 266 aa8.75□□□□□ -1.01
SCFD1-201ENST00000311943 ATF4P18848 351 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-201ENST00000311943 PSMB3P49720 205 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms