RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CNTFRP26992 372 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 SSBP2P81877 361 aaPredicted RBP10.26□□□□□ -0.77
RETREG3-201ENST00000309428 OR10AG1Q8NH19 301 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 ZNF714Q96N38 554 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 GPR82Q96P67 336 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 TRAV9-1A0A075B6T8 112 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 TRBV6-6A0A0A6YYG2 114 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 SAP30O75446 220 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 KLF17Q5JT82 389 aaPredicted RBP10.26□□□□□ -0.77
RETREG3-201ENST00000309428 SFXN3Q9BWM7 321 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 IGHV3OR16-10A0A075B7F0 116 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 CCL21O00585 134 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 RPEQ96AT9 228 aa10.26□□□□□ -0.77
RETREG3-201ENST00000309428 A1L4Q6 167 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 J3QR89 54 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 NCR2O95944 276 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 TGFAP01135 160 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 CLEC3BP05452 202 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 RPL27AP46776 148 aaKnown RBP10.25□□□□□ -0.77
RETREG3-201ENST00000309428 CD69Q07108 199 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 EPDR1Q9UM22 224 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 INSIG2Q9Y5U4 225 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 PMS2P5A8MQ11 134 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 GUSBP1Q15486 140 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 LCNL1Q6ZST4 164 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 Q9H3A6 140 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 KMT2EQ8IZD2 1858 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 TET2Q6N021 2002 aaPredicted RBP10.25□□□□□ -0.77
RETREG3-201ENST00000309428 PKD1L2Q7Z442 2459 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 IGHV3-49A0A0A0MS15 119 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 E7EUB6 86 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 C17orf58Q2M2W7 97 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 VSTM2AQ8TAG5 236 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 PRR7Q8TB68 274 aa10.25□□□□□ -0.77
RETREG3-201ENST00000309428 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 FBXL15Q9H469 300 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 UPK2O00526 184 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 VDAC2P45880 294 aaPredicted RBP10.24□□□□□ -0.77
RETREG3-201ENST00000309428 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 RITA1Q96K30 269 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 GAFA1Q96PS6 74 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 A0A1B0GUT8 65 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 NDUFB8O95169 186 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 ADIPOQQ15848 244 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 OR2K2Q8NGT1 345 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 TMEM160Q9NX00 188 aa10.24□□□□□ -0.77
RETREG3-201ENST00000309428 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
RETREG3-201ENST00000309428 TRAV30A0A087WSZ9 112 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 FAM231BA6NCW3 169 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 K7EMI3 77 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 LOXL3P58215 753 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 RBPMS2Q6ZRY4 209 aaKnown RBP10.23□□□□□ -0.77
RETREG3-201ENST00000309428 ZNF414Q96IQ9 312 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 LOC107984156A0A0G2JMH3 177 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.23□□□□□ -0.77
RETREG3-201ENST00000309428 C17orf100A8MU93 164 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 NPIPB11E5RHQ5 1161 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 YPEL1O60688 119 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 ARL17AQ8IVW1 177 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 STXBP6Q8NFX7 210 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 YPEL2Q96QA6 119 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 M0R3E3 92 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 ASCL5Q7RTU5 278 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 PNKDQ8N490 385 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 DCHS2Q6V1P9 2916 aa10.23□□□□□ -0.77
RETREG3-201ENST00000309428 MTORP42345 2549 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 NAV2Q8IVL1 2488 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 H3BVH4 76 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 MRPS16Q9Y3D3 137 aaKnown RBP10.22□□□□□ -0.77
RETREG3-201ENST00000309428 IGHV3-66A0A0C4DH42 116 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 LY6DQ14210 128 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 SMIM12Q96EX1 92 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 RAXQ9Y2V3 346 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 IL4P05112 153 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 EVI2AP22794 236 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 PRCDQ00LT1 54 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 KLRD1Q13241 179 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 IGFL4Q6B9Z1 124 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 FAM57AQ8TBR7 257 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 PRELID3AQ96N28 172 aa10.22□□□□□ -0.77
RETREG3-201ENST00000309428 SCGB1C2P0DMR2 95 aa10.21□□□□□ -0.77
RETREG3-201ENST00000309428 CENPVQ7Z7K6 275 aaPredicted RBP10.21□□□□□ -0.77
RETREG3-201ENST00000309428 PIP4P1Q86T03 277 aa10.21□□□□□ -0.77
RETREG3-201ENST00000309428 MBD3L4A6NDZ8 208 aaPredicted RBP10.21□□□□□ -0.77
RETREG3-201ENST00000309428 MBD3L3A6NE82 208 aaPredicted RBP10.21□□□□□ -0.77
RETREG3-201ENST00000309428 MBD3L5A6NJ08 208 aaPredicted RBP10.21□□□□□ -0.77
RETREG3-201ENST00000309428 LINC00310P59036 64 aa10.21□□□□□ -0.77
RETREG3-201ENST00000309428 OR4C13Q8NGP0 309 aa10.21□□□□□ -0.77
RETREG3-201ENST00000309428 MBD3L2Q8NHZ7 208 aaPredicted RBP10.21□□□□□ -0.77
RETREG3-201ENST00000309428 MRPL32Q9BYC8 188 aaKnown RBP10.21□□□□□ -0.77
RETREG3-201ENST00000309428 ST20Q9HBF5 79 aa10.21□□□□□ -0.77
RETREG3-201ENST00000309428 H7C2G1 150 aa10.21□□□□□ -0.78
RETREG3-201ENST00000309428 TCF15Q12870 199 aa10.21□□□□□ -0.78
RETREG3-201ENST00000309428 C2orf83Q53S99 150 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms