RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TOMM20LQ6UXN7 152 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 CYB561D1Q8N8Q1 229 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 MYOZ3Q8TDC0 251 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 SHANK2-AS3Q9BTD1 123 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 SEC11CQ9BY50 192 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 SLC35B3Q9H1N7 401 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 SMDT1Q9H4I9 107 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 A0A0G2JLM5 398 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 CLPSL1A2RUU4 121 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 SCGB2A1O75556 95 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 SNRPCP09234 159 aaKnown RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 GP9P14770 177 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 ARL3P36405 182 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 AKR1C3P42330 323 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 UBE2L3P68036 154 aaKnown RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 FOXE3Q13461 319 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 FAM90A2PQ658T7 463 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 TEX38Q6PEX7 206 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 OR4X2Q8NGF9 303 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 FXYD5Q96DB9 178 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 PAXXQ9BUH6 204 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 NKX6-2Q9C056 277 aaPredicted RBP5.36□□□□□ -1.55
PTCD2-201ENST00000308077 OR51M1Q9H341 326 aa5.36□□□□□ -1.55
PTCD2-201ENST00000308077 C11orf94C9JXX5 98 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 BMPR1BO00238 502 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 MRPS12O15235 138 aaKnown RBP5.35□□□□□ -1.55
PTCD2-201ENST00000308077 ELANEP08246 267 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 CEBPGP53567 150 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 SLC35B1P78383 322 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 TMEM88Q6PEY1 159 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 CBLN2Q8IUK8 224 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 RNF152Q8N8N0 203 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 OR4F5Q8NH21 305 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 ZNF418Q8TF45 676 aaPredicted RBP5.35□□□□□ -1.55
PTCD2-201ENST00000308077 OR5B12Q96R08 314 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 OR4F4Q96R69 305 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 C20orf24Q9BUV8 137 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 TMEM167BQ9NRX6 74 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 HIVEP2P31629 2446 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 ZNF98A6NK75 572 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 NPPCP23582 126 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 TAGLN2P37802 199 aaKnown RBP5.35□□□□□ -1.55
PTCD2-201ENST00000308077 RELQ04864 619 aaPredicted RBP5.35□□□□□ -1.55
PTCD2-201ENST00000308077 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 CLRN3Q8NCR9 226 aa5.35□□□□□ -1.55
PTCD2-201ENST00000308077 WIPF2Q8TF74 440 aaPredicted RBP5.35□□□□□ -1.55
PTCD2-201ENST00000308077 GGTLC3B5MD39 225 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 H3BQ15 152 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 H3BTX0 84 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 ZNF207O43670 478 aaKnown RBP5.34□□□□□ -1.55
PTCD2-201ENST00000308077 RPL15P61313 204 aaKnown RBP5.34□□□□□ -1.55
PTCD2-201ENST00000308077 TCTEX1D4Q5JR98 221 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 SOHLH1Q5JUK2 328 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 UNQ9165/PRO28630Q6UXU0 137 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 SVBPQ8N300 66 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 KLHDC1Q8N7A1 406 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 TMEM14CQ9P0S9 112 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 RABAC1Q9UI14 185 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 ARL2-SNX15V9GYD0 113 aa5.34□□□□□ -1.55
PTCD2-201ENST00000308077 SCO2A0A1W2PP80 73 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 A0A1W2PRE2 83 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 TMEM250H0YL14 139 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 NDUFA4O00483 81 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 NDUFS6O75380 124 aaKnown RBP5.33□□□□□ -1.56
PTCD2-201ENST00000308077 APOHP02749 345 aaPredicted RBP5.33□□□□□ -1.56
PTCD2-201ENST00000308077 IGLC2P0DOY2 106 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 SRSF2Q01130 221 aaKnown RBP5.33□□□□□ -1.56
PTCD2-201ENST00000308077 DEFA6Q01524 100 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 C18orf65Q6ZTR6 163 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 STXBP6Q8NFX7 210 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 BLNKQ8WV28 456 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 C17orf77Q96MU5 243 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 ZNF586Q9NXT0 402 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 PEF1Q9UBV8 284 aaKnown RBP5.33□□□□□ -1.56
PTCD2-201ENST00000308077 PDE6DO43924 150 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 GGCTO75223 188 aaKnown RBP5.33□□□□□ -1.56
PTCD2-201ENST00000308077 CRYBA1P05813 215 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 LGALS1P09382 135 aaKnown RBP5.33□□□□□ -1.56
PTCD2-201ENST00000308077 NBEAP1P0C6P0 100 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 CRYBB3P26998 211 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 MYCNOSP40205 109 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 AWAT1Q58HT5 328 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 FAM209BQ5JX69 171 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 BPIFA4PQ86YQ2 179 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 LINC01006Q8NI28 216 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 RPUSD4Q96CM3 377 aaKnown RBP5.33□□□□□ -1.56
PTCD2-201ENST00000308077 UBE2E2Q96LR5 201 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 TXNDC17Q9BRA2 123 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 DERL1Q9BUN8 251 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 PARLQ9H300 379 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 C16orf95Q9H693 158 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 SMAD5-AS1Q9Y6J3 95 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 U3KQE9 123 aa5.33□□□□□ -1.56
PTCD2-201ENST00000308077 IGHV3OR16-13A0A075B7E8 117 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 IGHV3-49A0A0A0MS15 119 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 IGHV3-74A0A0B4J1X5 117 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 IGHV3-66A0A0C4DH42 116 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 F6UZH7 168 aa5.32□□□□□ -1.56
PTCD2-201ENST00000308077 BUB3O43684 328 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms