RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 FAM90A27PA6NNH2 459 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 HBBP68871 147 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 C8orf46Q8TAG6 207 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 GTSF1Q8WW33 167 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 PRSS22Q9GZN4 317 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 AKAP6Q13023 2319 aa12.02□□□□□ -0.48
CSDC2-201ENST00000306149 TOMM40O96008 361 aa12.02□□□□□ -0.49
CSDC2-201ENST00000306149 TCRAP04437 139 aa12.02□□□□□ -0.49
CSDC2-201ENST00000306149 FOXC1Q12948 553 aa12.02□□□□□ -0.49
CSDC2-201ENST00000306149 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
CSDC2-201ENST00000306149 CIARTQ8N365 385 aaPredicted RBP12.02□□□□□ -0.49
CSDC2-201ENST00000306149 STPG4Q8N801 248 aa12.02□□□□□ -0.49
CSDC2-201ENST00000306149 C5orf17Q8NAS9 161 aa12.02□□□□□ -0.49
CSDC2-201ENST00000306149 ONECUT1Q9UBC0 465 aa12.02□□□□□ -0.49
CSDC2-201ENST00000306149 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.49
CSDC2-201ENST00000306149 TRAV9-2A0A087WT02 112 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 SH2D7A6NKC9 451 aaPredicted RBP12.01□□□□□ -0.49
CSDC2-201ENST00000306149 B9A039 149 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 LTAP01374 205 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 IGLC1P0CG04 106 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 TSPOP30536 169 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 HIGD1AQ9Y241 93 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 A0A1W2PRD5 423 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 A0A1W2PRF3 423 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 A0A1W2PRM7 423 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 C19orf71A6NCJ1 209 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 CNIH1O95406 144 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 PAX2Q02962 417 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 MUC15Q8N387 334 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 C17orf77Q96MU5 243 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 HILPDAQ9Y5L2 63 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 A8MWL6 223 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 SIAH2O43255 324 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 P01737 135 aa12.01□□□□□ -0.49
CSDC2-201ENST00000306149 KLF17Q5JT82 389 aaPredicted RBP12.01□□□□□ -0.49
CSDC2-201ENST00000306149 NDUFB8O95169 186 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 PLP1P60201 277 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 GOLT1AQ6ZVE7 132 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 SLC25A39Q9BZJ4 359 aaPredicted RBP12□□□□□ -0.49
CSDC2-201ENST00000306149 GFRA4Q9GZZ7 299 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 TIMM23O14925 209 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 Q56UQ5 140 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 SSX8Q7RTT4 187 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 PRNTQ86SH4 94 aa12□□□□□ -0.49
CSDC2-201ENST00000306149 I3L2K1 104 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 ARF6P62330 175 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 FAM120AOSQ5T036 256 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 RASL11BQ9BPW5 248 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 IGKV1-17P01599 117 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 FBLN7Q53RD9 439 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 TNFRSF14Q92956 283 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 DAZAP1Q96EP5 407 aaKnown RBP11.99□□□□□ -0.49
CSDC2-201ENST00000306149 C1RLQ9NZP8 487 aa11.99□□□□□ -0.49
CSDC2-201ENST00000306149 ZNF672Q499Z4 452 aaPredicted RBP11.98□□□□□ -0.49
CSDC2-201ENST00000306149 CHCHD1Q96BP2 118 aaKnown RBP11.98□□□□□ -0.49
CSDC2-201ENST00000306149 COTL1Q14019 142 aa11.98□□□□□ -0.49
CSDC2-201ENST00000306149 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
CSDC2-201ENST00000306149 ORAOV1Q8WV07 137 aa11.98□□□□□ -0.49
CSDC2-201ENST00000306149 TMEM70Q9BUB7 260 aa11.98□□□□□ -0.49
CSDC2-201ENST00000306149 FAM231BA6NCW3 169 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 CRXO43186 299 aaPredicted RBP11.97□□□□□ -0.49
CSDC2-201ENST00000306149 KLRD1Q13241 179 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 CDSNQ15517 529 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 RBPMS2Q6ZRY4 209 aaKnown RBP11.97□□□□□ -0.49
CSDC2-201ENST00000306149 SPATA12Q7Z6I5 190 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 NPIPB6E9PJ23 425 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 IGLL1P15814 213 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 COL8A1P27658 744 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 Q86TA4 180 aa11.97□□□□□ -0.49
CSDC2-201ENST00000306149 RBPJQ06330 500 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 VKORC1Q9BQB6 163 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 SCNM1Q9BWG6 230 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 K7EIM0 57 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 IGLV2-11P01706 119 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 ZNF138P52744 262 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 C16orf54Q6UWD8 224 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 OTORQ9NRC9 128 aa11.96□□□□□ -0.49
CSDC2-201ENST00000306149 LY6LH3BQJ8 138 aa11.96□□□□□ -0.5
CSDC2-201ENST00000306149 TCF21O43680 179 aa11.96□□□□□ -0.5
CSDC2-201ENST00000306149 LINC00173Q6ZV60 143 aa11.96□□□□□ -0.5
CSDC2-201ENST00000306149 OR4F17Q8NGA8 305 aa11.96□□□□□ -0.5
CSDC2-201ENST00000306149 TMEM14CQ9P0S9 112 aa11.96□□□□□ -0.5
CSDC2-201ENST00000306149 IGHV1-24A0A0C4DH33 117 aa11.95□□□□□ -0.5
CSDC2-201ENST00000306149 ZNF785A8K8V0 405 aa11.95□□□□□ -0.5
CSDC2-201ENST00000306149 HOXB4P17483 251 aaPredicted RBP11.95□□□□□ -0.5
CSDC2-201ENST00000306149 HINT1P49773 126 aaPredicted RBP11.95□□□□□ -0.5
CSDC2-201ENST00000306149 TMEM190Q8WZ59 177 aa11.95□□□□□ -0.5
CSDC2-201ENST00000306149 HES1Q14469 280 aa11.94□□□□□ -0.5
CSDC2-201ENST00000306149 NDFIP1Q9BT67 221 aa11.94□□□□□ -0.5
CSDC2-201ENST00000306149 TP73-AS1Q9UF72 201 aa11.94□□□□□ -0.5
CSDC2-201ENST00000306149 LOC102724200A0A096LPH7 203 aaPredicted RBP11.94□□□□□ -0.5
CSDC2-201ENST00000306149 TRBV6-1A0A0K0K1D8 114 aa11.94□□□□□ -0.5
CSDC2-201ENST00000306149 K7ENP7 123 aa11.94□□□□□ -0.5
CSDC2-201ENST00000306149 M0R3E3 92 aa11.94□□□□□ -0.5
CSDC2-201ENST00000306149 IL4P05112 153 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms