RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 C9orf106Q8NAJ2 232 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 NCOR1P1Q9H4R4 102 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 C9orf172C9J069 976 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 COX7A1P24310 79 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 FCGR2BP31994 310 aaPredicted RBP10.53□□□□□ -0.72
TRIM35-201ENST00000305364 CFHR2P36980 270 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 KIR2DL2P43627 348 aaPredicted RBP10.53□□□□□ -0.72
TRIM35-201ENST00000305364 C17orf58Q2M2W7 97 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 RNFT1Q5M7Z0 435 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 UTF1Q5T230 341 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 MBNL2Q5VZF2 373 aaKnown RBP10.53□□□□□ -0.72
TRIM35-201ENST00000305364 BCL6BQ8N143 479 aaPredicted RBP10.53□□□□□ -0.72
TRIM35-201ENST00000305364 DYSFO75923 2080 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 K7EP34 96 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 SMAD7O15105 426 aaKnown RBP10.53□□□□□ -0.72
TRIM35-201ENST00000305364 OTORQ9NRC9 128 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 INSIG2Q9Y5U4 225 aa10.53□□□□□ -0.72
TRIM35-201ENST00000305364 CREBBPQ92793 2442 aa10.52□□□□□ -0.72
TRIM35-201ENST00000305364 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.72
TRIM35-201ENST00000305364 GTSF1Q8WW33 167 aa10.52□□□□□ -0.72
TRIM35-201ENST00000305364 RPRMLQ8N4K4 120 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 TMEM160Q9NX00 188 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 PPIAL4CA0A0B4J2A2 164 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 PRR33A8MZF0 331 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 PPIAL4GP0DN37 164 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 UCNP55089 124 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 DDB2Q92466 427 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 HIST1H4GQ99525 98 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 ZNF747Q9BV97 191 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
TRIM35-201ENST00000305364 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 IGKV3-15P01624 115 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 MC5RP33032 325 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 RPEQ96AT9 228 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 USP34Q70CQ2 3546 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 OTOGLQ3ZCN5 2332 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 WT1-ASQ06250 92 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 NDUFA4L2Q9NRX3 87 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 S4R3C0 116 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 PPIAL4EA0A075B759 164 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 NCR2O95944 276 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 PPIAL4FP0DN26 164 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 GLRXP35754 106 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 CT83Q5H943 113 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 PATE2Q6UY27 113 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 Q86TA4 180 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 AMN1Q8IY45 258 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 UFC1Q9Y3C8 167 aa10.51□□□□□ -0.73
TRIM35-201ENST00000305364 C16orf97H3BN30 126 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 CD3EP07766 207 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 PSG3Q16557 428 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 MBD6Q96DN6 1003 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 TNRC6AQ8NDV7 1962 aaKnown RBP10.5□□□□□ -0.73
TRIM35-201ENST00000305364 CHD8Q9HCK8 2581 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 TM4SF5O14894 197 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 PRB3Q04118 309 aaPredicted RBP10.5□□□□□ -0.73
TRIM35-201ENST00000305364 C1orf229Q6ZS94 237 aaPredicted RBP10.5□□□□□ -0.73
TRIM35-201ENST00000305364 ZCCHC24Q8N2G6 241 aaKnown RBP10.5□□□□□ -0.73
TRIM35-201ENST00000305364 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
TRIM35-201ENST00000305364 C8orf46Q8TAG6 207 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 FOXC2Q99958 501 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 ZNF492Q9P255 531 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 SPEGQ15772 3267 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 NAV3Q8IVL0 2385 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 A0A1B0GW15 77 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 IL4P05112 153 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 ZNF788Q6ZQV5 615 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 OR4A5Q8NH83 315 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 MYOZ3Q8TDC0 251 aa10.5□□□□□ -0.73
TRIM35-201ENST00000305364 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 LINC01545Q5VT33 79 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 C1orf162Q8NEQ5 155 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-201ENST00000305364 LINC00312Q9Y6C7 94 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 Q6AWC8 147 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 LYZL1Q6UWQ5 148 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 LINC00322Q6ZN03 302 aaPredicted RBP10.49□□□□□ -0.73
TRIM35-201ENST00000305364 TRIOO75962 3097 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 A0A1W2PPM0 123 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 TMEM167AQ8TBQ9 72 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 TANC2Q9HCD6 1990 aa10.49□□□□□ -0.73
TRIM35-201ENST00000305364 A0A1B0GWB2 263 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 LGALS7P47929 136 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 LEPP41159 167 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 TMEM30BQ3MIR4 351 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 FDCSPQ8NFU4 85 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 A0A1W2PPI3 338 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 ZNF785A8K8V0 405 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 M0R3E3 92 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 HAX1O00165 279 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
TRIM35-201ENST00000305364 LOC107984156A0A0G2JMH3 177 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 SPRNQ5BIV9 151 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 SCGB1D4Q6XE38 83 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms