RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 OR4F17Q8NGA8 305 aa10□□□□□ -0.81
CCDC7-202ENST00000302316 RPUSD4Q96CM3 377 aaKnown RBP10□□□□□ -0.81
CCDC7-202ENST00000302316 METTL26Q96S19 204 aa10□□□□□ -0.81
CCDC7-202ENST00000302316 SCO2A0A1W2PP80 73 aa9.99□□□□□ -0.81
CCDC7-202ENST00000302316 CLPSL1A2RUU4 121 aa9.99□□□□□ -0.81
CCDC7-202ENST00000302316 H3BTX0 84 aa9.99□□□□□ -0.81
CCDC7-202ENST00000302316 ZNF207O43670 478 aaKnown RBP9.99□□□□□ -0.81
CCDC7-202ENST00000302316 HIST1H1EP10412 219 aaKnown RBP9.99□□□□□ -0.81
CCDC7-202ENST00000302316 ZNF674Q2M3X9 581 aa9.99□□□□□ -0.81
CCDC7-202ENST00000302316 UBE2E2Q96LR5 201 aa9.99□□□□□ -0.81
CCDC7-202ENST00000302316 NSD1Q96L73 2696 aaPredicted RBP9.99□□□□□ -0.81
CCDC7-202ENST00000302316 LGALS1P09382 135 aaKnown RBP9.98□□□□□ -0.81
CCDC7-202ENST00000302316 SUMO1P63165 101 aaKnown RBP9.98□□□□□ -0.81
CCDC7-202ENST00000302316 UNQ9165/PRO28630Q6UXU0 137 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 OR8I2Q8N0Y5 310 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 NIPSNAP3BQ9BS92 247 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 PARLQ9H300 379 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 H3BQ15 152 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 MRPS12O15235 138 aaKnown RBP9.98□□□□□ -0.81
CCDC7-202ENST00000302316 SCO1O75880 301 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 SNAPINO95295 136 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 RPL7P18124 248 aaKnown RBP9.98□□□□□ -0.81
CCDC7-202ENST00000302316 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
CCDC7-202ENST00000302316 SMIM7Q9BQ49 75 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
CCDC7-202ENST00000302316 ZNF586Q9NXT0 402 aa9.98□□□□□ -0.81
CCDC7-202ENST00000302316 IGHV3-66A0A0C4DH42 116 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 ZNF320A2RRD8 509 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 ZNF727A8MUV8 499 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 NDUFB4O95168 129 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 NPPCP23582 126 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 KHDC1LQ5JSQ8 128 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 ATRAIDQ6UW56 229 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 TMEM190Q8WZ59 177 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 C16orf95Q9H693 158 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 IGHV3OR16-13A0A075B7E8 117 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 IGHV3-49A0A0A0MS15 119 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 IGHV3-74A0A0B4J1X5 117 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 M0R036 132 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 TCF21O43680 179 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 BUB3O43684 328 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 CRLF1O75462 422 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 CRYBB3P26998 211 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 RPEL1Q2QD12 228 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 LINC01006Q8NI28 216 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 C11orf52Q96A22 123 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 ELOVL1Q9BW60 279 aa9.97□□□□□ -0.81
CCDC7-202ENST00000302316 SETXQ7Z333 2677 aaKnown RBP9.96□□□□□ -0.81
CCDC7-202ENST00000302316 NF1P21359 2839 aa9.96□□□□□ -0.81
CCDC7-202ENST00000302316 TRBV19A0A075B6N1 114 aa9.96□□□□□ -0.82
CCDC7-202ENST00000302316 APOHP02749 345 aaPredicted RBP9.96□□□□□ -0.82
CCDC7-202ENST00000302316 TCTEX1D4Q5JR98 221 aa9.96□□□□□ -0.82
CCDC7-202ENST00000302316 CLRN3Q8NCR9 226 aa9.96□□□□□ -0.82
CCDC7-202ENST00000302316 DERL1Q9BUN8 251 aa9.96□□□□□ -0.82
CCDC7-202ENST00000302316 FAM106AQ4KMX7 169 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 FAM74A3Q4VXF1 159 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 AWAT1Q58HT5 328 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 C17orf77Q96MU5 243 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 Q9H3A6 140 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 A0A087WW49 117 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 PGPA6NDG6 321 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 ATF4P18848 351 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-202ENST00000302316 CDX1P47902 265 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-202ENST00000302316 C18orf65Q6ZTR6 163 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 WIPF2Q8TF74 440 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-202ENST00000302316 U3KQE9 123 aa9.95□□□□□ -0.82
CCDC7-202ENST00000302316 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
CCDC7-202ENST00000302316 NDUFA7O95182 113 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 SLC25A5P05141 298 aaKnown RBP9.94□□□□□ -0.82
CCDC7-202ENST00000302316 MYCNOSP40205 109 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 C1orf194Q5T5A4 169 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 GPHB5Q86YW7 130 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 GPR82Q96P67 336 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 OTORQ9NRC9 128 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 NAT8Q9UHE5 227 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 SLC17A3O00476 420 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 GALR1P47211 349 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 PDE6HQ13956 83 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 C4orf3Q8WVX3 66 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 TCEAL7Q9BRU2 100 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 DAZ1Q9NQZ3 744 aaKnown RBP9.94□□□□□ -0.82
CCDC7-202ENST00000302316 SMAD5-AS1Q9Y6J3 95 aa9.94□□□□□ -0.82
CCDC7-202ENST00000302316 CYSRT1A8MQ03 144 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 HAX1O00165 279 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 PEX7O00628 323 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 GNG5P63218 68 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 SRSF2Q01130 221 aaKnown RBP9.93□□□□□ -0.82
CCDC7-202ENST00000302316 PNRC1Q12796 327 aaPredicted RBP9.93□□□□□ -0.82
CCDC7-202ENST00000302316 TMEM241Q24JQ0 296 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 DEFB136Q30KP8 78 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 TM4SF20Q53R12 229 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 SIGLEC15Q6ZMC9 328 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 EXOC3-AS1Q8N2X6 119 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 C11orf44Q8N8P7 122 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 C5orf17Q8NAS9 161 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 KLHL30-AS1Q8NEE0 82 aa9.93□□□□□ -0.82
CCDC7-202ENST00000302316 C2CD4CQ8TF44 421 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms