RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 PTTG1O95997 202 aa4.41□□□□□ -1.7
ITGB1-201ENST00000302278 HOXA5P20719 270 aa4.41□□□□□ -1.7
ITGB1-201ENST00000302278 PRSS3P35030 304 aa4.41□□□□□ -1.7
ITGB1-201ENST00000302278 KRTAP10-4P60372 401 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-201ENST00000302278 TIMM8BQ9Y5J9 83 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-201ENST00000302278 TMEM56-RWDD3S4R434 201 aa4.41□□□□□ -1.7
ITGB1-201ENST00000302278 IGHV3OR16-12A0A075B7B8 117 aa4.4□□□□□ -1.7
ITGB1-201ENST00000302278 CLINT1Q14677 625 aa4.4□□□□□ -1.7
ITGB1-201ENST00000302278 IDNKQ5T6J7 187 aa4.4□□□□□ -1.7
ITGB1-201ENST00000302278 COQ8AQ8NI60 647 aa4.4□□□□□ -1.7
ITGB1-201ENST00000302278 NPIPB3Q92617 1050 aa4.4□□□□□ -1.7
ITGB1-201ENST00000302278 U3KQ87 197 aa4.4□□□□□ -1.7
ITGB1-201ENST00000302278 LINC00854A0A1B0GVQ3 168 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 MEIS3P1A6NDR6 274 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 F6UB75 175 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 FABP1P07148 127 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 CNN1P51911 297 aaKnown RBP4.4□□□□□ -1.71
ITGB1-201ENST00000302278 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.71
ITGB1-201ENST00000302278 ENKURQ8TC29 256 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 ZNF586Q9NXT0 402 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 HSPB7Q9UBY9 170 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 A0A096LPF7 62 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 PRSS46E5RG02 174 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 OXTP01178 125 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 PIGPP57054 158 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 CCDC71LQ8N9Z2 235 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 GNPNAT1Q96EK6 184 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-201ENST00000302278 ODF3Q96PU9 254 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 FUNDC2Q9BWH2 189 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 SLC25A32Q9H2D1 315 aa4.4□□□□□ -1.71
ITGB1-201ENST00000302278 TSC22D2O75157 780 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 GCSHP23434 173 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 SURF2Q15527 256 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-201ENST00000302278 OR4B1Q8NGF8 309 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 NAA50Q9GZZ1 169 aaKnown RBP4.39□□□□□ -1.71
ITGB1-201ENST00000302278 TNXBP22105 4242 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 TEX13DA0A0J9YY54 714 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-201ENST00000302278 CXCL2P19875 107 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 GAMTQ14353 236 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 SELENOHQ8IZQ5 122 aaKnown RBP4.39□□□□□ -1.71
ITGB1-201ENST00000302278 LHFPL5Q8TAF8 219 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 RBPMSQ93062 196 aaKnown RBP4.39□□□□□ -1.71
ITGB1-201ENST00000302278 VSIG2Q96IQ7 327 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 LINC00052Q96N35 136 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 LOC100506127A0A0U1RQW1 187 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 UPK1BO75841 260 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 IGKV3-20P01619 116 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 GALR1P47211 349 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 AKR1C2P52895 323 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 PLP1P60201 277 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 RNASE12Q5GAN4 147 aaKnown RBP4.39□□□□□ -1.71
ITGB1-201ENST00000302278 FAM122CQ6P4D5 195 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 GLYATL2Q8WU03 294 aa4.39□□□□□ -1.71
ITGB1-201ENST00000302278 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 RGS13O14921 159 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 DEFB130BP0DP73 79 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 DEFB130AP0DP74 79 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 LRCOL1A6NCL2 159 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 H7BYZ3 331 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 J3QL48 77 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 SIVA1O15304 175 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 HLA-DMAP28067 261 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 S100A7P31151 101 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 ZNF90Q03938 601 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 SSBP1Q04837 148 aaKnown RBP4.38□□□□□ -1.71
ITGB1-201ENST00000302278 KLF9Q13886 244 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-201ENST00000302278 SPINK13Q1W4C9 94 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 TMEM144Q7Z5S9 345 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 SYT8Q8NBV8 401 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 IGKV1OR2-108A0A075B7D4 117 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 H3BRN7 92 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 MRPS12O15235 138 aaKnown RBP4.38□□□□□ -1.71
ITGB1-201ENST00000302278 IFNA5P01569 189 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 IL7P13232 177 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 CD300CQ08708 224 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 MZT2BQ6NZ67 158 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 ACOT7LQ6ZUV0 252 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 DEFB104AQ8WTQ1 72 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 C16orf92Q96LL3 132 aa4.38□□□□□ -1.71
ITGB1-201ENST00000302278 RTBDNQ9BSG5 229 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-201ENST00000302278 HEYLQ9NQ87 328 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-201ENST00000302278 CRYM-AS1A6NIL9 109 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 M0R2Z0 102 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 PLA2G1BP04054 148 aaKnown RBP4.37□□□□□ -1.71
ITGB1-201ENST00000302278 PRM2P04554 102 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 VBP1P61758 197 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 TSPAN5P62079 268 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 FCN2Q15485 313 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 GGNBP1Q5YKI7 109 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 TRIQKQ629K1 86 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 BAP18Q8IXM2 172 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 NAA60Q9H7X0 242 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 MDFICQ9P1T7 246 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 ZNF98A6NK75 572 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 K7EPK0 472 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 DNAH10OSP0CZ25 163 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 ASAH1Q13510 395 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 SPCS2Q15005 226 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 TMEM229BQ8NBD8 167 aa4.37□□□□□ -1.71
ITGB1-201ENST00000302278 OR8A1Q8NGG7 326 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms