RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 RAB2AP61019 212 aa11.48□□□□□ -0.57
UBXN1-202ENST00000301935 RPP25LQ8N5L8 163 aaKnown RBP11.48□□□□□ -0.57
UBXN1-202ENST00000301935 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
UBXN1-202ENST00000301935 ELOVL1Q9BW60 279 aa11.48□□□□□ -0.57
UBXN1-202ENST00000301935 SLC25A39Q9BZJ4 359 aaPredicted RBP11.48□□□□□ -0.57
UBXN1-202ENST00000301935 TECRQ9NZ01 308 aaKnown RBP11.48□□□□□ -0.57
UBXN1-202ENST00000301935 DOK5Q9P104 306 aa11.48□□□□□ -0.57
UBXN1-202ENST00000301935 H3BRN7 92 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 C8orf88P0DMB2 117 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 SLURP1P55000 103 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 RAB14P61106 215 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 FAM122CQ6P4D5 195 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 UNQ9165/PRO28630Q6UXU0 137 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 OR9G4Q8NGQ1 327 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 FAM213BQ8TBF2 198 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 U3KQE9 123 aa11.47□□□□□ -0.57
UBXN1-202ENST00000301935 HUWE1Q7Z6Z7 4374 aaKnown RBP11.47□□□□□ -0.57
UBXN1-202ENST00000301935 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 ZNF98A6NK75 572 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
UBXN1-202ENST00000301935 OVOL1O14753 267 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 HBE1P02100 147 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 H2AFB1P0C5Y9 115 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 KHDC3LQ587J8 217 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 GCSAMLQ5JQS6 135 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 PQLC2Q6ZP29 291 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 DLX4Q92988 240 aaPredicted RBP11.46□□□□□ -0.57
UBXN1-202ENST00000301935 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 SEPSECSQ9HD40 501 aaKnown RBP11.46□□□□□ -0.57
UBXN1-202ENST00000301935 SIGLEC8Q9NYZ4 499 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 PLA2G2EQ9NZK7 142 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 SMPXQ9UHP9 88 aa11.46□□□□□ -0.57
UBXN1-202ENST00000301935 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.58
UBXN1-202ENST00000301935 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 RGS13O14921 159 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 BUB3O43684 328 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 CXorf1O96002 111 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 RPL7P18124 248 aaKnown RBP11.45□□□□□ -0.58
UBXN1-202ENST00000301935 IFITM2Q01629 132 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 BPIFA4PQ86YQ2 179 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 PRR25Q96S07 402 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
UBXN1-202ENST00000301935 TMEM213A2RRL7 107 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 C2orf70A6NJV1 201 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 C3orf84H3BNL1 204 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 STAG3L2P0CL84 134 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 STAG3L3P0CL85 134 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 MEOX2P50222 304 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 TM4SF20Q53R12 229 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 FAM74A1Q5RGS3 127 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 C9orf66Q5T8R8 295 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 OR8I2Q8N0Y5 310 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 UHRF2Q96PU4 802 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 TMEM14CQ9P0S9 112 aa11.44□□□□□ -0.58
UBXN1-202ENST00000301935 IGHV3OR16-8A0A075B7F1 116 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 HELTA6NFD8 242 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
UBXN1-202ENST00000301935 CBLN1P23435 193 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 GALR1P47211 349 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 PPT1P50897 306 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 C16orf54Q6UWD8 224 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 MIR17HGQ75NE6 70 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 SFT2D1Q8WV19 159 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 RHPN1-AS1Q9BWJ2 59 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 SLC25A22Q9H936 323 aa11.43□□□□□ -0.58
UBXN1-202ENST00000301935 MAP1LC3B2A6NCE7 125 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 CHEK1O14757 476 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 FOLR2P14207 255 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 FHITP49789 147 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 ZNF726P1Q15940 193 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 GUK1Q16774 197 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 FAM167A-AS1Q96KT0 104 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 PAXXQ9BUH6 204 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 SCRT1Q9BWW7 348 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 MAP1LC3BQ9GZQ8 125 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 OR51M1Q9H341 326 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 TMEM167BQ9NRX6 74 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 DNAH7Q8WXX0 4024 aa11.42□□□□□ -0.58
UBXN1-202ENST00000301935 OR7C2O60412 319 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 CSN3P07498 182 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 PSMB3P49720 205 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 INSL3P51460 131 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 PMS2P11Q13670 270 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 SAMD13Q5VXD3 122 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 SPATA31B1PQ5VZV4 182 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 LCN15Q6UWW0 184 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 IL34Q6ZMJ4 242 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 LYPD6BQ8NI32 183 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 ASCL2Q99929 193 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 SLC25A2Q9BXI2 301 aa11.41□□□□□ -0.58
UBXN1-202ENST00000301935 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.58
UBXN1-202ENST00000301935 HIST1H1EP10412 219 aaKnown RBP11.4□□□□□ -0.58
UBXN1-202ENST00000301935 CLLU1Q5K131 121 aa11.4□□□□□ -0.58
UBXN1-202ENST00000301935 SIGLEC15Q6ZMC9 328 aa11.4□□□□□ -0.58
UBXN1-202ENST00000301935 OR2K2Q8NGT1 345 aa11.4□□□□□ -0.58
UBXN1-202ENST00000301935 GLMPQ8WWB7 406 aa11.4□□□□□ -0.58
UBXN1-202ENST00000301935 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms