RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 STXBP6Q8NFX7 210 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 FLYWCH2Q96CP2 140 aaKnown RBP8.69□□□□□ -1.02
ZNF558-201ENST00000301475 RPUSD1Q9UJJ7 312 aaKnown RBP8.69□□□□□ -1.02
ZNF558-201ENST00000301475 A1L4Q6 167 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 INS-IGF2F8WCM5 200 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 IGLV1-44P01699 117 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 APOBEC3AP31941 199 aaPredicted RBP8.69□□□□□ -1.02
ZNF558-201ENST00000301475 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 SAMD13Q5VXD3 122 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 ZCCHC24Q8N2G6 241 aaKnown RBP8.69□□□□□ -1.02
ZNF558-201ENST00000301475 FAM216BQ8N7L0 139 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 OSR1Q8TAX0 266 aaPredicted RBP8.69□□□□□ -1.02
ZNF558-201ENST00000301475 FAM222BQ8WU58 562 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 ABHD17AQ96GS6 310 aa8.69□□□□□ -1.02
ZNF558-201ENST00000301475 TEX48A0A1B0GUV7 120 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 PLP1P60201 277 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 MZT1Q08AG7 82 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 PRNTQ86SH4 94 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 DEFB108BQ8NET1 73 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 OR5A1Q8NGJ0 315 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 SPRY3O43610 288 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 KIR2DL2P43627 348 aaPredicted RBP8.68□□□□□ -1.02
ZNF558-201ENST00000301475 ZNF833PQ6ZTB9 187 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 RAB9BQ9NP90 201 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 TPSG1Q9NRR2 321 aa8.68□□□□□ -1.02
ZNF558-201ENST00000301475 LOC389332A0A1B0GUA5 103 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 LGALS9BQ3B8N2 356 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 LGALS9CQ6DKI2 356 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 GOLT1AQ6ZVE7 132 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 EXOC3-AS1Q8N2X6 119 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 ZADH2Q8N4Q0 377 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 SRSF12Q8WXF0 261 aaKnown RBP8.67□□□□□ -1.02
ZNF558-201ENST00000301475 GAFA1Q96PS6 74 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 CCL13Q99616 98 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 IGHV3-21A0A0B4J1V1 117 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 A0A1W2PPI3 338 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 RPRMLQ8N4K4 120 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 OR9G4Q8NGQ1 327 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 C18orf15Q96N68 181 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 F11RQ9Y624 299 aaKnown RBP8.67□□□□□ -1.02
ZNF558-201ENST00000301475 APC2O95996 2303 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 ROS1P08922 2347 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 SPAARA0A1B0GVQ0 90 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 SMIM17P0DL12 118 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 DIAPH2-AS1Q14236 149 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 DEFB124Q8NES8 71 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 TMEM167AQ8TBQ9 72 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 GTSF1LQ9H1H1 148 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 LINC00574Q9H8X3 128 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 SIGLEC8Q9NYZ4 499 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 SPTBN4Q9H254 2564 aa8.67□□□□□ -1.02
ZNF558-201ENST00000301475 PPIAL4CA0A0B4J2A2 164 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 FCGR2BP31994 310 aaPredicted RBP8.66□□□□□ -1.02
ZNF558-201ENST00000301475 NMUP48645 174 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 RPL24P83731 157 aaKnown RBP8.66□□□□□ -1.02
ZNF558-201ENST00000301475 TMEM164Q5U3C3 297 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 HCP5Q6MZN7 132 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 TNFRSF14Q92956 283 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 TPPP3Q9BW30 176 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 SPTA1P02549 2419 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 D6R8Y8 96 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 ZNF883P0CG24 379 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
ZNF558-201ENST00000301475 ATP1A1-AS1Q5TC04 95 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 C9orf106Q8NAJ2 232 aa8.66□□□□□ -1.02
ZNF558-201ENST00000301475 NKX2-8O15522 239 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 AZU1P20160 251 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 FXYD2P54710 66 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 RIGQ13278 110 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 C1orf162Q8NEQ5 155 aaPredicted RBP8.65□□□□□ -1.02
ZNF558-201ENST00000301475 OR4X2Q8NGF9 303 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 PPIAL4EA0A075B759 164 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 SIVA1O15304 175 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 IGLV2-23P01705 113 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 CRYGCP07315 174 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 APELAP0DMC3 54 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 PPIAL4FP0DN26 164 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 FABP2P12104 132 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 CEACAM3P40198 252 aa8.65□□□□□ -1.02
ZNF558-201ENST00000301475 SUB1P53999 127 aaKnown RBP eCLIP8.65□□□□□ -1.02
ZNF558-201ENST00000301475 ZZEF1O43149 2961 aa8.65□□□□□ -1.03
ZNF558-201ENST00000301475 K7ERJ3 54 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 ZNF207O43670 478 aaKnown RBP8.64□□□□□ -1.03
ZNF558-201ENST00000301475 SMAGPQ0VAQ4 97 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 CLUHP3Q96NS8 147 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 TRGV9Q99603 122 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 TTTY13Q9BZ97 58 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 ANKRD11Q6UB99 2663 aaPredicted RBP8.64□□□□□ -1.03
ZNF558-201ENST00000301475 CRIP1P50238 77 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 PAX8Q06710 450 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 ZNF414Q96IQ9 312 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 TMEM213A2RRL7 107 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 SLC25A17O43808 307 aa8.64□□□□□ -1.03
ZNF558-201ENST00000301475 CCL3L1P16619 93 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms