RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TMEM160Q9NX00 188 aa12.15□□□□□ -0.46
HERPUD1-201ENST00000300302 IGLC2P0DOY2 106 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 MYCNOSP40205 109 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 RPL35P42766 123 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 Q8N2B8 174 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 OR4X2Q8NGF9 303 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 HIST1H2BAQ96A08 127 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 ZNF586Q9NXT0 402 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 MXRA5Q9NR99 2828 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 PGPA6NDG6 321 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 C9JCJ5 164 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 IGHV3-11P01762 117 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 ZNF414Q96IQ9 312 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 METTL26Q96S19 204 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 Q9H3A6 140 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
HERPUD1-201ENST00000300302 TRBV19A0A075B6N1 114 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 MT-ND4LP03901 98 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 SLC25A5P05141 298 aaKnown RBP12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 LINC01551Q86U37 167 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 LYPD1Q8N2G4 141 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 C2CD4CQ8TF44 421 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 OTORQ9NRC9 128 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
HERPUD1-201ENST00000300302 IGHV3OR16-8A0A075B7F1 116 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 LOC105371267A0A1B0GV96 52 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 CXorf65A6NEN9 183 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 NDUFA4O00483 81 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 PEX7O00628 323 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 MRPS12O15235 138 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 ELANEP08246 267 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 ATF4P18848 351 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 CNN1P51911 297 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 FOXE3Q13461 319 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 PDE6HQ13956 83 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 LCNL1Q6ZST4 164 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 C5orf17Q8NAS9 161 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 GPR82Q96P67 336 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 EPDR1Q9UM22 224 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 COLCA2A8K830 154 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 H3BTX0 84 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 GNG4P50150 75 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 C15orf54Q8N8G6 183 aa12.12□□□□□ -0.47
HERPUD1-201ENST00000300302 CLPSL1A2RUU4 121 aa12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 BUB3O43684 328 aa12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 GGCTO75223 188 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 TAS2R60P59551 318 aa12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 RNF212Q495C1 297 aa12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 C1orf194Q5T5A4 169 aa12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 CMTM2Q8TAZ6 248 aa12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 PEF1Q9UBV8 284 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-201ENST00000300302 ANK3Q12955 4377 aaKnown RBP12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 CLDN34H7C241 214 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 LY6G6DO95868 133 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 RPL15P61313 204 aaKnown RBP12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 CENPWQ5EE01 88 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 ANAPC16Q96DE5 110 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 ATG101Q9BSB4 218 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 CDC42EP3Q9UKI2 254 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 PGPEP1LA6NFU8 196 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 PSG9Q00887 426 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 ISOC2Q96AB3 205 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 AAMDCQ9H7C9 122 aa12.1□□□□□ -0.47
HERPUD1-201ENST00000300302 OTOGQ6ZRI0 2925 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 FAM181BA6NEQ2 426 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 CD99P14209 185 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 SRD5A1P18405 259 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 UBE2G1P62253 170 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 C17orf77Q96MU5 243 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 SERTAD4Q9NUC0 356 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
HERPUD1-201ENST00000300302 CYSRT1A8MQ03 144 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 RPLP1P05386 114 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 GALR1P47211 349 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 GNG5P63218 68 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 SIGLEC15Q6ZMC9 328 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 EXOC3-AS1Q8N2X6 119 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 YPEL4Q96NS1 127 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 AURKAIP1Q9NWT8 199 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 RPH3ALQ9UNE2 315 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 H7BYZ3 331 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 PPP1R2P9O14990 202 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 ZNF253O75346 499 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 TCRAP04437 139 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 TMEM183BQ1AE95 376 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 Q71RC1 249 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 RNF152Q8N8N0 203 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 U3KQE9 123 aa12.08□□□□□ -0.48
HERPUD1-201ENST00000300302 SLC17A3O00476 420 aa12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 ZNF207O43670 478 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-201ENST00000300302 CRYBA1P05813 215 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms