RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 Q86TA4 180 aa9.16□□□□□ -0.94
TRUB1-201ENST00000298746 HSD52Q0P140 79 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 SMKR1H3BMG3 65 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 M0R296 226 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 MEF2CQ06413 473 aaPredicted RBP9.15□□□□□ -0.94
TRUB1-201ENST00000298746 PCP2Q8IVA1 136 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 AMN1Q8IY45 258 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 OR4A5Q8NH83 315 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 GAFA1Q96PS6 74 aa9.15□□□□□ -0.94
TRUB1-201ENST00000298746 PSMB11A5LHX3 300 aa9.15□□□□□ -0.95
TRUB1-201ENST00000298746 PRR33A8MZF0 331 aa9.15□□□□□ -0.95
TRUB1-201ENST00000298746 C22orf46C9J442 243 aa9.15□□□□□ -0.95
TRUB1-201ENST00000298746 H3BRM9 83 aa9.15□□□□□ -0.95
TRUB1-201ENST00000298746 TWIST1Q15672 202 aa9.15□□□□□ -0.95
TRUB1-201ENST00000298746 TIMM23BQ5SRD1 257 aa9.15□□□□□ -0.95
TRUB1-201ENST00000298746 SAMD5Q5TGI4 173 aa9.15□□□□□ -0.95
TRUB1-201ENST00000298746 TMEM213A2RRL7 107 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 K7EP34 96 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 M0R3E3 92 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 SMAD7O15105 426 aaKnown RBP9.14□□□□□ -0.95
TRUB1-201ENST00000298746 NKX2-8O15522 239 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 CIDEAO60543 219 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 LTAP01374 205 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 GLRXP35754 106 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 LOXL1Q08397 574 aaPredicted RBP9.14□□□□□ -0.95
TRUB1-201ENST00000298746 CT83Q5H943 113 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 C2orf91Q6ZV80 131 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 PTPRBP23467 1997 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 IGKV1D-37A0A075B6S9 117 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 NDUFB3O43676 98 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 Q71RC1 249 aaPredicted RBP9.14□□□□□ -0.95
TRUB1-201ENST00000298746 IFI27L1Q96BM0 104 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 JMJD8Q96S16 334 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 OTORQ9NRC9 128 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 NHP2Q9NX24 153 aaKnown RBP9.14□□□□□ -0.95
TRUB1-201ENST00000298746 ZNF207O43670 478 aaKnown RBP9.14□□□□□ -0.95
TRUB1-201ENST00000298746 C1orf162Q8NEQ5 155 aaPredicted RBP9.14□□□□□ -0.95
TRUB1-201ENST00000298746 TMEM167AQ8TBQ9 72 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 GFRA4Q9GZZ7 299 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 C1RLQ9NZP8 487 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 ZNF492Q9P255 531 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 SH3BGRL2Q9UJC5 107 aa9.14□□□□□ -0.95
TRUB1-201ENST00000298746 J3QR89 54 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 HAX1O00165 279 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 CGB3P0DN86 165 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 CGB7P0DN87 165 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 FCGR2BP31994 310 aaPredicted RBP9.13□□□□□ -0.95
TRUB1-201ENST00000298746 DLX1P56177 255 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
TRUB1-201ENST00000298746 RPRMLQ8N4K4 120 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 FDCSPQ8NFU4 85 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 C8orf46Q8TAG6 207 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 MLST8Q9BVC4 326 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 PRSS22Q9GZN4 317 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 AAMDCQ9H7C9 122 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 ZNF71Q9NQZ8 489 aaPredicted RBP9.13□□□□□ -0.95
TRUB1-201ENST00000298746 PSG8Q9UQ74 426 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 LINC00312Q9Y6C7 94 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 TM4SF5O14894 197 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 IGHV1-46P01743 117 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 LYZL1Q6UWQ5 148 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 TTTY13Q9BZ97 58 aa9.13□□□□□ -0.95
TRUB1-201ENST00000298746 PPIAL4CA0A0B4J2A2 164 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 C19orf71A6NCJ1 209 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 K7EMI3 77 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 HBDP02042 147 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 PPIAL4GP0DN37 164 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 CR1LQ2VPA4 569 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 C17orf77Q96MU5 243 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 SCNM1Q9BWG6 230 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 C7orf69Q9H7B7 122 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 KLF12Q9Y4X4 402 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 COX7A1P24310 79 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 MTURNQ8N3F0 131 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 OR4X2Q8NGF9 303 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 OR5A1Q8NGJ0 315 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 SLC25A39Q9BZJ4 359 aaPredicted RBP9.12□□□□□ -0.95
TRUB1-201ENST00000298746 SIGLEC8Q9NYZ4 499 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 A0A1W2PPM0 123 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 G3V4G9 280 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 K7ERJ3 54 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 ORM1P02763 201 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 RUSC1-AS1Q66K80 236 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 ZNF788Q6ZQV5 615 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 SLC25A15Q9Y619 301 aa9.12□□□□□ -0.95
TRUB1-201ENST00000298746 PSG3Q16557 428 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 DSCAML1Q8TD84 2053 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 RITA1Q96K30 269 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 INSIG2Q9Y5U4 225 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 TRAV17A0A0B4J275 112 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 TEX48A0A1B0GUV7 120 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 A0A1W2PNU3 283 aaPredicted RBP9.11□□□□□ -0.95
TRUB1-201ENST00000298746 IL4P05112 153 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 SCGB2A2Q13296 93 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 C1orf210Q8IVY1 113 aa9.11□□□□□ -0.95
TRUB1-201ENST00000298746 TMEM133Q9H2Q1 129 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms