RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 A8MWL6 223 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 VSTM5A8MXK1 200 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 OR2J3O76001 311 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 C8orf31Q8N9H6 132 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 OR8B3Q8NGG8 313 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 KAAG1Q9UBP8 84 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 C19orf71A6NCJ1 209 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 CA7P43166 264 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 FBLN7Q53RD9 439 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 CHRDL1Q9BU40 450 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 ONECUT1Q9UBC0 465 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 ATRXP46100 2492 aa19.36■□□□□ 0.69
SPTSSA-201ENST00000298130 WNK2Q9Y3S1 2297 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 TSPOP30536 169 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 FMC1Q96HJ9 113 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 RASL11BQ9BPW5 248 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 PPIAL4CA0A0B4J2A2 164 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 PPIAL4GP0DN37 164 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 PMCHL2Q9BQD1 86 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 JKAMPQ9P055 326 aa19.35■□□□□ 0.69
SPTSSA-201ENST00000298130 Q86TA4 180 aa19.34■□□□□ 0.69
SPTSSA-201ENST00000298130 SIAH2O43255 324 aa19.34■□□□□ 0.69
SPTSSA-201ENST00000298130 UNQ5815/PRO19632Q6UWF5 114 aa19.34■□□□□ 0.69
SPTSSA-201ENST00000298130 ERASQ7Z444 233 aa19.34■□□□□ 0.69
SPTSSA-201ENST00000298130 IGKV1-17P01599 117 aa19.33■□□□□ 0.69
SPTSSA-201ENST00000298130 FAM120AOSQ5T036 256 aa19.33■□□□□ 0.69
SPTSSA-201ENST00000298130 IGHV1-24A0A0C4DH33 117 aa19.33■□□□□ 0.68
SPTSSA-201ENST00000298130 hDV102S1A0JD36 115 aa19.33■□□□□ 0.68
SPTSSA-201ENST00000298130 M0R3E3 92 aa19.33■□□□□ 0.68
SPTSSA-201ENST00000298130 CHEK1O14757 476 aa19.33■□□□□ 0.68
SPTSSA-201ENST00000298130 ZNF785A8K8V0 405 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 TCF21O43680 179 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 IGLV2-11P01706 119 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 TCF15Q12870 199 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 PTPRQQ9UMZ3 2332 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 FAM90A27PA6NNH2 459 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 I3L2K1 104 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 TIMM23O14925 209 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 ATP5L2Q7Z4Y8 100 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 KLHDC1Q8N7A1 406 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 TRAV9-2A0A087WT02 112 aa19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 APOBEC3AP31941 199 aaPredicted RBP19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 RBPMS2Q6ZRY4 209 aaKnown RBP19.32■□□□□ 0.68
SPTSSA-201ENST00000298130 MUC21A0A0G2JKD1 596 aa19.31■□□□□ 0.68
SPTSSA-201ENST00000298130 MUC21A0A140T8X8 626 aa19.31■□□□□ 0.68
SPTSSA-201ENST00000298130 ARF6P62330 175 aa19.31■□□□□ 0.68
SPTSSA-201ENST00000298130 MUC21Q5SSG8 566 aa19.31■□□□□ 0.68
SPTSSA-201ENST00000298130 ZC2HC1AQ96GY0 325 aa19.31■□□□□ 0.68
SPTSSA-201ENST00000298130 KLRD1Q13241 179 aa19.31■□□□□ 0.68
SPTSSA-201ENST00000298130 MRPL52Q86TS9 123 aaKnown RBP19.31■□□□□ 0.68
SPTSSA-201ENST00000298130 PVRIGQ6DKI7 326 aa19.3■□□□□ 0.68
SPTSSA-201ENST00000298130 TMEM70Q9BUB7 260 aa19.3■□□□□ 0.68
SPTSSA-201ENST00000298130 OR4C46A6NHA9 309 aa19.3■□□□□ 0.68
SPTSSA-201ENST00000298130 TMSB15BA0A087X1C1 80 aa19.29■□□□□ 0.68
SPTSSA-201ENST00000298130 IGHV3-23P01764 117 aa19.29■□□□□ 0.68
SPTSSA-201ENST00000298130 CD3EP07766 207 aa19.29■□□□□ 0.68
SPTSSA-201ENST00000298130 ARMS2P0C7Q2 107 aa19.29■□□□□ 0.68
SPTSSA-201ENST00000298130 AKAP6Q13023 2319 aa19.29■□□□□ 0.68
SPTSSA-201ENST00000298130 ZFP30Q9Y2G7 519 aa19.29■□□□□ 0.68
SPTSSA-201ENST00000298130 IL4P05112 153 aa19.28■□□□□ 0.68
SPTSSA-201ENST00000298130 FCGR2BP31994 310 aaPredicted RBP19.28■□□□□ 0.68
SPTSSA-201ENST00000298130 MUC15Q8N387 334 aa19.28■□□□□ 0.68
SPTSSA-201ENST00000298130 OTORQ9NRC9 128 aa19.28■□□□□ 0.68
SPTSSA-201ENST00000298130 IGF2RP11717 2491 aa19.28■□□□□ 0.68
SPTSSA-201ENST00000298130 LEPROTL1O95214 131 aa19.28■□□□□ 0.68
SPTSSA-201ENST00000298130 IGHV3OR16-8A0A075B7F1 116 aa19.27■□□□□ 0.68
SPTSSA-201ENST00000298130 K7EIM0 57 aa19.27■□□□□ 0.68
SPTSSA-201ENST00000298130 LINC00614P0C842 121 aa19.27■□□□□ 0.68
SPTSSA-201ENST00000298130 NGBQ9NPG2 151 aa19.27■□□□□ 0.68
SPTSSA-201ENST00000298130 LOC102724200A0A096LPH7 203 aaPredicted RBP19.27■□□□□ 0.68
SPTSSA-201ENST00000298130 PLP1P60201 277 aa19.27■□□□□ 0.68
SPTSSA-201ENST00000298130 HES1Q14469 280 aa19.27■□□□□ 0.68
SPTSSA-201ENST00000298130 TMUB1Q9BVT8 246 aa19.27■□□□□ 0.67
SPTSSA-201ENST00000298130 ZNF492Q9P255 531 aa19.27■□□□□ 0.67
SPTSSA-201ENST00000298130 COL6A6A6NMZ7 2263 aa19.26■□□□□ 0.67
SPTSSA-201ENST00000298130 B9A039 149 aa19.26■□□□□ 0.67
SPTSSA-201ENST00000298130 HTR1DP28221 377 aa19.26■□□□□ 0.67
SPTSSA-201ENST00000298130 GAGE1Q13065 139 aa19.26■□□□□ 0.67
SPTSSA-201ENST00000298130 C8orf49Q96NF6 230 aa19.26■□□□□ 0.67
SPTSSA-201ENST00000298130 RBM14Q96PK6 669 aaKnown RBP19.26■□□□□ 0.67
SPTSSA-201ENST00000298130 SYS1-DBNDD2H3BUS1 97 aa19.25■□□□□ 0.67
SPTSSA-201ENST00000298130 OR4F17Q8NGA8 305 aa19.25■□□□□ 0.67
SPTSSA-201ENST00000298130 CRIP1P50238 77 aa19.24■□□□□ 0.67
SPTSSA-201ENST00000298130 RBPJQ06330 500 aa19.24■□□□□ 0.67
SPTSSA-201ENST00000298130 SPTBN1Q01082 2364 aaKnown RBP19.24■□□□□ 0.67
SPTSSA-201ENST00000298130 TRBV19A0A075B6N1 114 aa19.24■□□□□ 0.67
SPTSSA-201ENST00000298130 IGHV3-35A0A0C4DH35 117 aa19.24■□□□□ 0.67
SPTSSA-201ENST00000298130 APOHP02749 345 aaPredicted RBP19.24■□□□□ 0.67
SPTSSA-201ENST00000298130 ZNF672Q499Z4 452 aaPredicted RBP19.24■□□□□ 0.67
SPTSSA-201ENST00000298130 IGFL4Q6B9Z1 124 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 SMIM12Q96EX1 92 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 HRNRQ86YZ3 2850 aaPredicted RBP19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 ZFHX3Q15911 3703 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 OVOL3O00110 214 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 CDSNQ15517 529 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 CT83Q5H943 113 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 ZNF491Q8N8L2 437 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 TNFRSF14Q92956 283 aa19.23■□□□□ 0.67
SPTSSA-201ENST00000298130 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 TCTAP57738 103 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms