RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 GPR82Q96P67 336 aa11.22□□□□□ -0.61
TMEM41A-201ENST00000296254 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.61
TMEM41A-201ENST00000296254 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
TMEM41A-201ENST00000296254 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
TMEM41A-201ENST00000296254 B2MP61769 119 aa11.21□□□□□ -0.61
TMEM41A-201ENST00000296254 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
TMEM41A-201ENST00000296254 PAIP2BQ9ULR5 123 aaKnown RBP11.21□□□□□ -0.61
TMEM41A-201ENST00000296254 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
TMEM41A-201ENST00000296254 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
TMEM41A-201ENST00000296254 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
TMEM41A-201ENST00000296254 BPIFCQ8NFQ6 507 aa11.2□□□□□ -0.62
TMEM41A-201ENST00000296254 TMEM147Q9BVK8 224 aa11.2□□□□□ -0.62
TMEM41A-201ENST00000296254 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
TMEM41A-201ENST00000296254 F5H768 121 aa11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 SLC25A6P12236 298 aa11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 ORM2P19652 201 aa11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 GATA2P23769 480 aaPredicted RBP11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 TMEM182Q6ZP80 229 aaPredicted RBP11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 MAPKAPK5-AS1Q8N8E1 139 aa11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 RSL24D1Q9UHA3 163 aaKnown RBP11.19□□□□□ -0.62
TMEM41A-201ENST00000296254 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 H3BRN7 92 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 MED6O75586 246 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 NUDT3O95989 172 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 ATP5G1P05496 136 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 AZU1P20160 251 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 S100A7P31151 101 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 ATP5G3P48201 142 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 RPP30P78346 268 aaKnown RBP11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 ACOT7LQ6ZUV0 252 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 TMED4Q7Z7H5 227 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 LRTM2Q8N967 370 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 ZNF738Q8NE65 137 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 LINC00588Q9Y4M8 146 aa11.18□□□□□ -0.62
TMEM41A-201ENST00000296254 CCL18P55774 89 aa11.17□□□□□ -0.62
TMEM41A-201ENST00000296254 AKR1C1Q04828 323 aa11.17□□□□□ -0.62
TMEM41A-201ENST00000296254 FCN2Q15485 313 aa11.17□□□□□ -0.62
TMEM41A-201ENST00000296254 TMEM128Q5BJH2 165 aa11.17□□□□□ -0.62
TMEM41A-201ENST00000296254 DYNC2LI1Q8TCX1 351 aa11.17□□□□□ -0.62
TMEM41A-201ENST00000296254 RNF141Q8WVD5 230 aa11.17□□□□□ -0.62
TMEM41A-201ENST00000296254 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
TMEM41A-201ENST00000296254 CBY3A6NI87 242 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 H3BP45 60 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 WRBO00258 174 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 SYNGR2O43760 224 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 VAMP1P23763 118 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 FGL1Q08830 312 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 TMEM256Q8N2U0 113 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
TMEM41A-201ENST00000296254 HERC1Q15751 4861 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 RPL7P18124 248 aaKnown RBP11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 TAS2R60P59551 318 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 HIST1H1AQ02539 215 aaPredicted RBP11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 SPANXN5Q5MJ07 72 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 OR8A1Q8NGG7 326 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 RAB2BQ8WUD1 216 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 TRIM63Q969Q1 353 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 C16orf74Q96GX8 76 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 SOSTQ9BQB4 213 aa11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 MRPS26Q9BYN8 205 aaKnown RBP11.15□□□□□ -0.62
TMEM41A-201ENST00000296254 CXCL3P19876 107 aa11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 RAP2BP61225 183 aa11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 CYP2G1PQ6ZSU1 146 aa11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 TMEM144Q7Z5S9 345 aa11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 RNASE8Q8TDE3 154 aaKnown RBP11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 LINC01587Q99440 93 aa11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 HIGD1AQ9Y241 93 aa11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
TMEM41A-201ENST00000296254 A0A087X0K7 114 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 FABP12A6NFH5 140 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 IL5P05113 134 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 LINC00869P0C866 280 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 RHOBP62745 196 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 PPP1R1AQ13522 171 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 CLINT1Q14677 625 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 Q8N1X5 172 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 UHRF2Q96PU4 802 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 KRTAP1-5Q9BYS1 174 aa11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 SLIRPQ9GZT3 109 aaKnown RBP11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 STRAPQ9Y3F4 350 aaKnown RBP11.13□□□□□ -0.63
TMEM41A-201ENST00000296254 SFT2D2O95562 160 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 TNFSF8P32971 234 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 CDKN1BP46527 198 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 AP3S2P59780 193 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 PLP1P60201 277 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 TTC32Q5I0X7 151 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 SPATA12Q7Z6I5 190 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 BCL7BQ9BQE9 202 aa11.12□□□□□ -0.63
TMEM41A-201ENST00000296254 SMCO3A2RU48 225 aa11.11□□□□□ -0.63
TMEM41A-201ENST00000296254 HYPMO75409 117 aa11.11□□□□□ -0.63
TMEM41A-201ENST00000296254 HOXB5P09067 269 aa11.11□□□□□ -0.63
TMEM41A-201ENST00000296254 HTN1P15515 57 aa11.11□□□□□ -0.63
TMEM41A-201ENST00000296254 PSG3Q16557 428 aa11.11□□□□□ -0.63
TMEM41A-201ENST00000296254 ZNF493Q6ZR52 646 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms